Pairwise Orthologs for DANRE08557

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene DANRE08557 (E7F136)

E Danio rerio | Tripartite motif-containing 59 [trim59]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Branchiostoma floridae	BRAFL15293		A0A9J7L9B6
			E	Petromyzon marinus	PETMA04657		S4RGW7
			E	Scyliorhinus torazame	SCYTO12585		A0A401NI39
			E	Chiloscyllium punctatum	CHIPU07322		A0A401SEX4
			E	Callorhinchus milii	CALMI01240		A0A4W3JQ59
			E	Anguilla anguilla	ANGAN43592		XP_035241028
			E	Anabas testudineus	ANATE19271		ENSATEG00000014753.1
			E	Seriola dumerili	SERDU32416		A0A3B4VQX8
			E	Echeneis naucrates	ECHNA06566		A0A665U7F3
			E	Cynoglossus semilaevis	CYNSE23297		A0A3P8WN97
			E	Scophthalmus maximus	SCOMX22328		A0A6A4SJ54
			E	Dicentrarchus labrax	DICLA07638		XP_051253819
			E	Sparus aurata	SPAAU16848		A0A671USN5
			E	Mola mola	MOLML07476		A0A3Q3X458
			E	Takifugu rubripes	TAKRU04738		A0A3B5K8S3
			E	Tetraodon nigroviridis	TETNG05582		H3CQJ1
			E	Oryzias melastigma	ORYME06977		A0A3B3DFS6
			E	Nothobranchius furzeri	NOTFU10073		A0A1A8B792
			E	Kryptolebias marmoratus	KRYMA16412		A0A3Q3BDL3
			E	Cyprinodon variegatus	CYPVA03694		A0A3Q2FHT0
			E	Gambusia affinis	GAMAF07589		ENSGAFG00000012845.1
			E	Poecilia formosa	POEFO04753		A0A096M524
			E	Poecilia reticulata	POERE06445		A0A3P9MZZ4
			E	Xiphophorus maculatus	XIPMA12179		M4AV95
			E	Salarias fasciatus	SALFA45566		A0A672GBR4

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