Pairwise Orthologs for DANRE02487

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene DANRE02487 (Q6PFU4)

E Danio rerio | Cell division control protein 42 homolog [cdc42]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Branchiostoma floridae	BRAFL32006		C3ZIB9
			E	Branchiostoma lanceolatum	BRALA05628		BL09682
			E	Eptatretus burgeri	EPTBU08908		A0A8C4N8E2
			E	Scyliorhinus torazame	SCYTO05731		A0A401PCV3
			E	Chiloscyllium punctatum	CHIPU17314		A0A401RG49
			E	Callorhinchus milii	CALMI22526		V9KVW7
			E	Lepisosteus oculatus	LEPOC09778		W5LYK5
			E	Seriola dumerili	SERDU07098		A0A3B4U6V0
			E	Cynoglossus semilaevis	CYNSE03593		A0A3P8VCG7
			E	Oryzias latipes	ORYLA14227		A0A3P9IEF1
			E	Oryzias melastigma	ORYME01240		A0A3B3CXI3
			E	Gambusia affinis	GAMAF00273		ENSGAFG00000006699.1
			E	Poecilia formosa	POEFO10646		A0A087XEX5
			E	Poecilia reticulata	POERE27715		A0A3P9PY05
			E	Xiphophorus maculatus	XIPMA18298		A0A3B5QT87
			E	Astatotilapia calliptera	ASTCA33342		A0A3P8R5T1
			E	Oreochromis aureus	OREAU14963		A0A668VH43
			E	Amphilophus citrinellus	AMPCI23301		A0A3Q0SR71
			E	Gadus morhua	GADMO27675		A0A8C4ZND7
			E	Esox lucius	ESOLU48949		A0A3P8ZYY3
			E	Salmo trutta	SALTR31771		A0A673W733
			E	Astyanax mexicanus	ASTMX06441		ENSAMXG00000019820
			E	Electrophorus electricus	ELEEL38013		A0A4W4EMQ3
			E	Sinocyclocheilus grahami	SINGR18808		A0A672QRJ7
			E	Latimeria chalumnae	LATCH12570		H3B7Y9

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