Pairwise Orthologs for CYPVA12321

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CYPVA12321 (A0A3Q2CHA6)

E Cyprinodon variegatus | [heparan sulfate]-glucosamine N-sulfotransferase [NDST2]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Chiloscyllium punctatum	CHIPU15721		A0A401T402
			E	Callorhinchus milii	CALMI02417		A0A4W3H4B9
			E	Lepisosteus oculatus	LEPOC14062		W5N5A6
			E	Anguilla anguilla	ANGAN55595		XP_035256639
			E	Anabas testudineus	ANATE08930		A0A3Q1IYK7
			E	Seriola dumerili	SERDU29521		A0A3B4UT32
			E	Echeneis naucrates	ECHNA10227		A0A665U2W1
			E	Cynoglossus semilaevis	CYNSE05531		A0A3P8WPD0
			E	Scophthalmus maximus	SCOMX08690		ENSSMAG00000018592.1
			E	Dicentrarchus labrax	DICLA03970		A0A8P4KS02
			E	Gasterosteus aculeatus	GASAC09625		G3ND18
			E	Sparus aurata	SPAAU10104		A0A671W654
			E	Mola mola	MOLML11425		A0A3Q3VVI4
			E	Takifugu rubripes	TAKRU00281		A0A674NHE1
			E	Oryzias javanicus	ORYJA15811		A0A437DGU6
			E	Oryzias melastigma	ORYME33357		A0A3B3DNK9
			E	Kryptolebias marmoratus	KRYMA01778		A0A3Q3AR52
			E	Gambusia affinis	GAMAF27829		A0A315VJG8
			E	Poecilia formosa	POEFO19492		A0A087Y878
			E	Poecilia reticulata	POERE08775		A0A3P9NQV9
			E	Xiphophorus maculatus	XIPMA19919		M4AL05
			E	Salarias fasciatus	SALFA52949		A0A672H458
			E	Astatotilapia calliptera	ASTCA08142		A0A3P8NXX2
			E	Haplochromis burtoni	HAPBU29412		A0A3Q2X0E4
			E	Neolamprologus brichardi	NEOBR28942		A0A3Q4N182

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