Pairwise Orthologs for CYPVA08455

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CYPVA08455 (A0A3Q2EB18)

E Cyprinodon variegatus | Semaphorin-3C [SEMA4D]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Scyliorhinus torazame	SCYTO01080		A0A401P945
			E	Chiloscyllium punctatum	CHIPU08455		A0A401SI63
			E	Callorhinchus milii	CALMI25931		A0A4W3IHU2
			E	Lepisosteus oculatus	LEPOC07386		W5N1E3
			E	Anguilla anguilla	ANGAN47533		XP_035246867
			E	Anabas testudineus	ANATE10698		ENSATEG00000016867.1
			E	Seriola dumerili	SERDU27182		A0A3B4UTW3
			E	Echeneis naucrates	ECHNA50754		A0A665UC73
			E	Cynoglossus semilaevis	CYNSE08728		A0A3P8WUE4
			E	Scophthalmus maximus	SCOMX09741		ENSSMAG00000005595.1
			E	Dicentrarchus labrax	DICLA20352		XP_051268538
			E	Sparus aurata	SPAAU33666		A0A671W0Y7
			E	Mola mola	MOLML06517		A0A3Q3VKZ2
			E	Takifugu rubripes	TAKRU43229		A0A674N7X6
			E	Tetraodon nigroviridis	TETNG10799		H3CPY8
			E	Oryzias javanicus	ORYJA05922		ENSOJAG00000004445.1
			E	Oryzias latipes	ORYLA02516		ENSORLG00000005743
			E	Oryzias melastigma	ORYME18800		A0A3B3D888
			E	Nothobranchius furzeri	NOTFU03365		A0A8C6K9K4
			E	Kryptolebias marmoratus	KRYMA04612		A0A3Q3AU17
			E	Gambusia affinis	GAMAF03279		ENSGAFG00000011828.1
			E	Poecilia formosa	POEFO09573		A0A087XV17
			E	Poecilia reticulata	POERE05426		A0A3P9PTY9
			E	Xiphophorus maculatus	XIPMA34825		M4AIF1
			E	Salarias fasciatus	SALFA12370		A0A672FFF4

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