Pairwise Orthologs for CYPVA01424

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CYPVA01424 (A0A3Q2EG34)

E Cyprinodon variegatus | Reticulon 4 receptor like 1

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Scyliorhinus torazame	SCYTO11056		A0A401NIY3
			E	Callorhinchus milii	CALMI35713		A0A4W3K4V0
			E	Lepisosteus oculatus	LEPOC08952		W5MHA1
			E	Anabas testudineus	ANATE19505		ENSATEG00000022012.1
			E	Seriola dumerili	SERDU23984		A0A3B4UCP2
			E	Echeneis naucrates	ECHNA06074		A0A665TPU9
			E	Cynoglossus semilaevis	CYNSE22989		A0A3P8W1I6
			E	Scophthalmus maximus	SCOMX22122		A0A8D3BY06
			E	Dicentrarchus labrax	DICLA07943		A0A8C4NWL1
			E	Gasterosteus aculeatus	GASAC19809		G3P9T9
			E	Sparus aurata	SPAAU16638		A0A671UGU7
			E	Mola mola	MOLML07570		A0A3Q3X1F1
			E	Takifugu rubripes	TAKRU03755		A0A674NJP3
			E	Tetraodon nigroviridis	TETNG05654		H3DFJ6
			E	Oryzias javanicus	ORYJA09402		ENSOJAG00000019871.1
			E	Oryzias latipes	ORYLA03262		ENSORLG00000004859
			E	Oryzias melastigma	ORYME07162		A0A3B3BFM1
			E	Nothobranchius furzeri	NOTFU10255		rtn4rl1
			E	Kryptolebias marmoratus	KRYMA22814		A0A3Q2ZUL0
			E	Gambusia affinis	GAMAF17625		ENSGAFG00000012935.1
			E	Poecilia formosa	POEFO07251		A0A087XEH0
			E	Poecilia reticulata	POERE05845		A0A3P9P0N7
			E	Xiphophorus maculatus	XIPMA12358		M3ZPK1
			E	Salarias fasciatus	SALFA45983		A0A672GDH9
			E	Astatotilapia calliptera	ASTCA08831		A0A3P8NY94

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