Pairwise Orthologs for CROPO17790

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CROPO17790 (A0A7M4F453)

E Crocodylus porosus | SLIT-ROBO Rho GTPase activating protein 3 [SRGAP3]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Chiloscyllium punctatum	CHIPU19080		A0A401RR56
			E	Callorhinchus milii	CALMI11359		A0A4W3K046
			E	Lepisosteus oculatus	LEPOC13775		W5MUA8
			E	Anguilla anguilla	ANGAN45310		XP_035243643
			E	Anabas testudineus	ANATE03454		ENSATEG00000005283.1
			E	Seriola dumerili	SERDU27879		A0A3B4UGI4
			E	Echeneis naucrates	ECHNA04928		A0A665VVA6
			E	Cynoglossus semilaevis	CYNSE03058		A0A3P8UT59
			E	Scophthalmus maximus	SCOMX27596		ENSSMAG00000000633.1
			E	Dicentrarchus labrax	DICLA22851		A0A8C4HTL7
			E	Gasterosteus aculeatus	GASAC02350		G3N7C0
			E	Sparus aurata	SPAAU39470		A0A671UGW8
			E	Mola mola	MOLML03004		A0A3Q3XCR0
			E	Takifugu rubripes	TAKRU21819		A0A674NS95
			E	Tetraodon nigroviridis	TETNG02433		H3DAW3
			E	Oryzias javanicus	ORYJA02182		ENSOJAG00000004406.1
			E	Oryzias latipes	ORYLA13698		ENSORLG00000000702
			E	Oryzias melastigma	ORYME00066		A0A3B3C4B9
			E	Nothobranchius furzeri	NOTFU17298		A0A8C6PHB4
			E	Kryptolebias marmoratus	KRYMA10272		A0A3Q3BFL6
			E	Cyprinodon variegatus	CYPVA17836		A0A3Q2C6F5
			E	Gambusia affinis	GAMAF01400		ENSGAFG00000021650.1
			E	Poecilia formosa	POEFO16521		A0A087X9W0
			E	Poecilia reticulata	POERE27460		A0A3P9NVT5
			E	Xiphophorus maculatus	XIPMA18661		M3ZH10

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