Pairwise Orthologs for CREFR04191

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CREFR04191 (CFRG4191)

E Creolimax fragrantissima

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Dictyostelium discoideum	DICDI01154		DCD3B_DICDI
			E	Tieghemostelium lacteum	TIELA04662		A0A151ZJK3
			E	Punctularia strigosozonata (strain HHB-11173)	PUNST00829		XP_007378839
			E	Armillaria gallica	ARMGA03655		A0A2H3EA86
			E	Armillaria ostoyae	ARMOS09401		A0A284RBL9
			E	Rhizophagus irregularis (strain DAOM 197198w)	RHIIW05138		A0A015L927
			E	Absidia glauca	ABSGL10769		A0A168RIT1
			E	Branchiostoma floridae	BRAFL05468		C3Y1U1
			E	Branchiostoma lanceolatum	BRALA13557		BL16459
			E	Petromyzon marinus	PETMA06595		S4R4L0
			E	Scyliorhinus torazame	SCYTO05632		A0A401PBN2
			E	Chiloscyllium punctatum	CHIPU12639		A0A401SV47
			E	Lepisosteus oculatus	LEPOC12831		W5MZ25
			E	Anabas testudineus	ANATE15400		A0A3Q1IW42
			E	Seriola dumerili	SERDU20891		A0A3B4T9D2
			E	Echeneis naucrates	ECHNA14635		A0A665TPM3
			E	Cynoglossus semilaevis	CYNSE29962		A0A3P8V2A0
			E	Scophthalmus maximus	SCOMX30950		ENSSMAG00000008944.1
			E	Dicentrarchus labrax	DICLA45509		A0A8P4G2G2
			E	Gasterosteus aculeatus	GASAC16366		G3Q151
			E	Sparus aurata	SPAAU56472		A0A671WUC8
			E	Takifugu rubripes	TAKRU16985		H2TG99
			E	Tetraodon nigroviridis	TETNG06832		H3CZ01
			E	Oryzias javanicus	ORYJA20388		A0A3S2MHR1
			E	Oryzias latipes	ORYLA00411		A0A3P9MPF4

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