Pairwise Orthologs for CORMO20928

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CORMO20928 (A0A8U7M093)

E Corvus moneduloides | Toll-like receptor 2 [LOC116444420]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Astyanax mexicanus	ASTMX12308		ENSAMXG00000025582
			E	Ictalurus punctatus	ICTPU20764		A0A2D0Q5E0
			E	Cyprinus carpio carpio	CYPCA29822		A0A8C1Q2P9
			E	Sinocyclocheilus grahami	SINGR26153		A0A672MI90
			E	Falco tinnunculus	FALTI16758		A0A8C4TT82
			E	Ficedula albicollis	FICAL11753		U3KI47
			E	Taeniopygia guttata	TAEGU23885		H0Z431
			E	Melopsittacus undulatus	MELUD08455		ENSMUNG00000010732.1
			E	Tyto alba	TYTAL36558		XP_042664262
			E	Vanessa tameamea	VANTA15660		A0A8B8IHI8
			E	Anopheles darlingi	ANODA05686		W5JBQ4
			E	Gigantopelta aegis	GIGAE20970		XP_041366909
			E	Patella vulgata	PATVU20819		XP_050411167
			E	Picea glauca	PICGL13471		PGL00013839
			E	Persea americana	PERAE19178		MRB53_019219
			E	Glycine max	SOYBN64735		I1KLQ0
			E	Quercus lobata	QUELO13753		A0A7N2KRN2
			E	Gossypium arboreum	GOSAR38396		LOC108462306
			E	Chloebia gouldiae	CHLGU23528		ENSEGOG00005011483.1
			E	Chloebia gouldiae	CHLGU23529		ENSEGOG00005011487.1
			E	Chloebia gouldiae	CHLGU23530		ENSEGOG00005011488.1
			E	Chloebia gouldiae	CHLGU23531		ENSEGOG00005011492.1
			E	Lepisosteus oculatus	LEPOC12603		W5NNW2
			E	Anabas testudineus	ANATE15128		A0A3Q1HWM2
			E	Seriola dumerili	SERDU15956		A0A3B4V0P6

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