Pairwise Orthologs for CORDF06848

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CORDF06848 (A0A179IET5)

E Cordyceps confragosa | GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosylt

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Acanthamoeba castellanii str. Neff	ACACA11209		L8GNP5
			E	Entamoeba dispar (strain ATCC PRA-260 / SAW760)	ENTDS06631		B0EUB2
			E	Entamoeba histolytica	ENTHI02293		A0A5K1UPV6
			E	Entamoeba histolytica (strain ATCC 30459 / HM-1:IMSS / ABRM)	ENTH102430		A0A5K1UPV6
			E	Entamoeba invadens IP1	ENTIV06420		A0A0A1U4A1
			E	Entamoeba nuttalli (strain P19)	ENTNP03694		K2GZC5
			E	Cavenderia fasciculata (strain SH3)	CAVFA03720		F4QE30
			E	Dictyostelium discoideum	DICDI11662		ALG11_DICDI
			E	Dictyostelium purpureum	DICPU01365		F0Z9Y0
			E	Tieghemostelium lacteum	TIELA02625		A0A152A7L4
			E	Thecamonas trahens ATCC 50062	THETB06727		A0A0L0DFI1
			E	Guillardia theta	GUITH08092		EKX38590
			E	Guillardia theta (strain CCMP2712)	GUITC17230		L1IRY6
			E	Bodo saltans	BODSA01376		A0A0S4JLQ0
			E	Leishmania donovani (strain BPK282A1)	LEIDB01221		E9BT41
			E	Leishmania infantum	LEIIN01199		A0A6L0XSM7
			E	Leishmania major strain Friedlin	LEIMA06493		E9AFZ8
			E	Leishmania mexicana (strain MHOM/GT/2001/U1103)	LEIMU06819		E9B751
			E	Leishmania braziliensis	LEIBR01237		A4HNI6
			E	Leptomonas pyrrhocoris	LEPPY00068		A0A0M9GB46
			E	Leptomonas seymouri	LEPSE03780		A0A0N0P6F7
			E	Trypanosoma vivax (strain Y486)	TRYVY16800		G0U2R1
			E	Trypanosoma rangeli	TRYRA05658		A0A3R7K7Z3
			E	Trypanosoma cruzi (strain CL Brener)	TRYCC00596		A0A2V2XN08
			E	Trypanosoma brucei brucei (strain 927/4 GUTat10.1)	TRYB202163		Q38E70

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