Pairwise Orthologs for COLSU08031

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene COLSU08031 (A0A066WZJ2)

E Colletotrichum sublineola | Delta(14)-sterol reductase

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			B	Frankia inefficax (strain DSM 45817 / CECT 9037 / EuI1c)	FRAIE05609		FraEuI1c_5716
			E	Oreochromis niloticus	ORENI17817		A0A669B8S8
			E	Notamacropus eugenii	NOTEU06631		ENSMEUG00000009398
			E	Anas platyrhynchos platyrhynchos	ANAPP17330		ENSAPLG00000002980.2
			E	Taeniopygia guttata	TAEGU25929		A0A674GDI6
			E	Serinus canaria	SERCA16577		A0A8C9UCM2
			E	Varanus komodoensis	VARKO04273		A0A8D2LB21
			E	Haemonchus placei	HAEPC15984		A0A0N4WW79
			E	Ixodes persulcatus	IXOPE14815		HPB47_027942
			E	Tribolium castaneum	TRICA05946		D2A2U2
			E	Aureococcus anophagefferens	AURAN01938		F0XZ27
			E	Aegilops tauschii	AEGTA32989		EMT25703
			E	Takifugu rubripes	TAKRU12861		A0A674NRC2
			E	Takifugu rubripes	TAKRU12868		H2RS13
			E	Salmo salar	SALSA95599		ENSSSAG00000086305.1
			E	Salmo salar	SALSA13615		ENSSSAG00000090510.1
			E	Salmo trutta	SALTR81497		A0A673WN04
			E	Salmo trutta	SALTR76694		A0A673VYN8
			E	Cimex lectularius	CIMLE10005		A0A8I6SJH4
			E	Cimex lectularius	CIMLE11284		A0A8I6RAT1
			B	Parachlamydia acanthamoebae (strain UV7)	PARAV01107		WP_013924762
			B	Protochlamydia amoebophila (strain UWE25)	PARUW01216		WP_011175770
			B	Waddlia chondrophila (strain ATCC VR-1470 / WSU 86-1044)	WADCW01766		WP_013182881
			B	Legionella longbeachae serogroup 1 (strain NSW150)	LEGLN01354		WP_041819009
			B	Tatlockia micdadei	TATMI02125		DWF

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