Pairwise Orthologs for COLAP40010

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene COLAP40010 (A0A2K5KBP7)

E Colobus angolensis palliatus | C2H2-type domain-containing protein

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Amphilophus citrinellus	AMPCI14533		A0A3Q0QXR1
			E	Loxodonta africana	LOXAF03955		G3UMF3
			E	Oryctolagus cuniculus	RABIT13543		ENSOCUG00000003505.2
			E	Fukomys damarensis	FUKDA23318		ENSFDAG00000007978.1
			E	Cavia porcellus	CAVPO24140		H0V4G5
			E	Octodon degus	OCTDE22836		ENSODEG00000002601.1
			E	Nannospalax galili	NANGA26844		A0A8C6R668
			E	Ictidomys tridecemlineatus	ICTTR13376		ENSSTOG00000021364
			E	Cercocebus atys	CERAT45132		A0A2K5L970
			E	Macaca fascicularis	MACFA44429		ENSMFAG00000004528.1
			E	Macaca mulatta	MACMU46922		F6R8F2
			E	Macaca nemestrina	MACNE45364		A0A2K6C1W1
			E	Mandrillus leucophaeus	MANLE39969		A0A2K5XRH1
			E	Homo sapiens	HUMAN100983		ZXDB_HUMAN
			E	Pan troglodytes	PANTR46132		H2R4P8
			E	Nomascus leucogenys	NOMLE38569		G1S2W3
			E	Aotus nancymaae	AOTNA41769		A0A2K5BU91
			E	Cebus imitator	CEBIM39006		A0A2K5R642
			E	Saimiri boliviensis boliviensis	SAIBB39032		A0A2K6TQ89
			E	Carlito syrichta	CARSF24776		ENSTSYG00000007412.2
			E	Microcebus murinus	MICMU03769		ENSMICG00000009255
			E	Propithecus coquereli	PROCO31838		A0A2K6EMS7
			E	Tupaia belangeri	TUPBE00933		ENSTBEG00000001799
			E	Vicugna pacos	VICPA10581		ENSVPAG00000007315
			E	Tursiops truncatus	TURTR01567		ENSTTRG00000004499

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