Pairwise Orthologs for COLAP09954

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene COLAP09954 (A0A2K5K2U1)

E Colobus angolensis palliatus | KIAA2012

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Arthrobotrys oligospora (strain ATCC 24927 / CBS 115.81 / DSM 1491)	ARTOA02878		G1X925
			E	Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181)	NEOFI05695		A1DB41
			E	Ustilago maydis (strain 521 / FGSC 9021)	USTMA01658		A0A0D1E448
			E	Chiloscyllium punctatum	CHIPU14009		A0A401SZ10
			E	Cynoglossus semilaevis	CYNSE23539		A0A3P8UH44
			E	Amphiprion percula	AMPPE03659		A0A3P8TH79
			E	Danio rerio	DANRE13858		ENSDARG00000021979.1
			E	Oryctolagus cuniculus	RABIT11924	1:1	ENSOCUG00000003626.3
			E	Fukomys damarensis	FUKDA01618	1:1	ENSFDAG00000016957.1
			E	Heterocephalus glaber	HETGA15413	1:1	ENSHGLG00100008646.1
			E	Chinchilla lanigera	CHILA14711	1:1	A0A8C2YKX5
			E	Jaculus jaculus	JACJA04852	1:1	A0A8C5LIS9
			E	Cricetulus griseus	CRIGR03342	1:1	ENSCGRG00000018432.1
			E	Mus musculus	MOUSE28873	1:1	E9Q295
			E	Rattus norvegicus	RATNO43083	1:1	D3ZI88
			E	Nannospalax galili	NANGA22810	1:1	A0A8C6Q9J9
			E	Cercocebus atys	CERAT00505	1:1	A0A2K5M7L5
			E	Macaca fascicularis	MACFA05806	1:1	ENSMFAG00000043184.1
			E	Macaca mulatta	MACMU06422	1:1	F7G082
			E	Macaca nemestrina	MACNE08673	1:1	A0A2K6BML0

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