Pairwise Orthologs for CHLRE16873

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CHLRE16873 (A8IL05)

E Chlamydomonas reinhardtii | Uncharacterized protein

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Emiliania huxleyi CCMP1516	EMIHU25069		R1DJE6
			E	Ostreococcus lucimarinus (strain CCE9901)	OSTLU04154		A4S730
			E	Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709)	MICCC07263		C1EIN7
			E	Micromonas pusilla (strain CCMP1545)	MICPC06581		C1N086
			E	Volvox carteri	VOLCA02644		VOLCADRAFT_103816
			E	Chlorella variabilis	CHLVA03470		E1ZCD5
			E	Klebsormidium flaccidum	KLEFL14282		KFL_015910010
			E	Klebsormidium nitens	KLENI00179		A0A1Y1IXL5
			E	Chara braunii	CHABU03000		A0A388JUL6
			E	Marchantia polymorpha	MARPO19102		A0A2R6WSS7
			E	Ceratopteris richardii	CERRI06791		A0A8T2V514
			E	Ginkgo biloba	GINBI07563		evm.TU.chr12.268
			E	Welwitschia mirabilis	WELMI01066		W.mirabilis.05296
			E	Picea sitchensis	PICSI14544		PSI00014541
			E	Amborella trichopoda	AMBTC22295		W1PQK3
			E	Zostera marina	ZOSMR11683		A0A0K9PGS2
			E	Asparagus officinalis	ASPOF11296		A0A5P1F177
			E	Oryza brachyantha	ORYBR25397		J3MK47
			E	Oryza glaberrima	ORYGL24082		I1Q9X2
			E	Oryza longistaminata	ORYLO05458		KN541838.1_FG001
			E	Oryza nivara	ORYNI30990		A0A0E0HZA2
			E	Oryza punctata	ORYPU26650		A0A0E0LJG8
			E	Oryza rufipogon	ORYRU31595		A0A0E0Q6U7
			E	Oryza sativa subsp. indica	ORYSI31029		B8B588
			E	Oryza sativa subsp. japonica	ORYSJ28325		B9FWQ5

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