Pairwise Orthologs for CHIPU12904

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CHIPU12904 (A0A401SVW6)

E Chiloscyllium punctatum | C-type lectin domain-containing protein

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Branchiostoma floridae	BRAFL27525		C3YB15
			E	Branchiostoma lanceolatum	BRALA15019		BL20268
			E	Petromyzon marinus	PETMA05394		S4R6Z8
			E	Eptatretus burgeri	EPTBU01353		A0A8C4NHI4
			E	Scyliorhinus torazame	SCYTO12917		A0A401NP59
			E	Callorhinchus milii	CALMI41836		A0A4W3J5N9
			E	Lepisosteus oculatus	LEPOC08142		W5MC37
			E	Anabas testudineus	ANATE10867		A0A3Q1KBC0
			E	Seriola dumerili	SERDU25272		A0A3B4V3T3
			E	Echeneis naucrates	ECHNA51690		A0A665W6T4
			E	Cynoglossus semilaevis	CYNSE08543		A0A3P8WHJ0
			E	Scophthalmus maximus	SCOMX09561		ENSSMAG00000001333.1
			E	Dicentrarchus labrax	DICLA20616		A0A8P4G5D0
			E	Gasterosteus aculeatus	GASAC04836		G3PXV5
			E	Sparus aurata	SPAAU34647		A0A671XDC5
			E	Mola mola	MOLML06372		A0A3Q3WER8
			E	Takifugu rubripes	TAKRU43788		H2TF66
			E	Tetraodon nigroviridis	TETNG10471		H3CUL7
			E	Oryzias javanicus	ORYJA07207		A0A3S2P3H0
			E	Oryzias latipes	ORYLA02660		ENSORLG00000008402
			E	Oryzias melastigma	ORYME19052		A0A3B3CZC9
			E	Nothobranchius furzeri	NOTFU03176		A0A8C6PGJ3
			E	Kryptolebias marmoratus	KRYMA06464		A0A3Q3A234
			E	Cyprinodon variegatus	CYPVA15294		A0A3Q2DHR1
			E	Gambusia affinis	GAMAF03102		ENSGAFG00000008745.1

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