Pairwise Orthologs for CERSS33284

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CERSS33284 (XP_004443790)

E Ceratotherium simum simum

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Loxodonta africana	LOXAF02650		G3U6Q4
			E	Oryctolagus cuniculus	RABIT00950		B8K199
			E	Cavia porcellus	CAVPO19614		H0WD46
			E	Chinchilla lanigera	CHILA03931		A0A8C2YV74
			E	Cricetulus griseus	CRIGR24061		A0A8C2LRI1
			E	Mus musculus	MOUSE51214		Q8VGW1
			E	Rattus norvegicus	RATNO15812		F1M6U9
			E	Nannospalax galili	NANGA21557		A0A8C6RVR6
			E	Ictidomys tridecemlineatus	ICTTR00195		ENSSTOG00000019736
			E	Bos indicus x Bos taurus	BOBOX34688		A0A4W2CHL5
			E	Bos taurus	BOVIN06979		ENSBTAG00000052045.1
			E	Ovis aries	SHEEP06358		W5PB51
			E	Sus scrofa	PIGXX34768		ENSSSCG00000035040.1
			E	Canis lupus familiaris	CANLF08413		ENSCAFG00000006221
			E	Vulpes vulpes	VULVU38115		ENSVVUG00000015679.1
			E	Mustela putorius furo	MUSPF01983		M3Z3Q8
			E	Ursus americanus	URSAM31628		A0A452QH93
			E	Ursus maritimus	URSMA32104		A0A452VKB2
			E	Equus caballus	HORSE38551		F6WV11
			E	Sarcophilus harrisii	SARHA00497		A0A7N4NFU8
			E	Monodelphis domestica	MONDO23995		A0A5F8GQ38
			E	Vombatus ursinus	VOMUR31258		A0A4X2KB19
			E	Ficedula albicollis	FICAL14239		ENSFALG00000008084
			E	Pelodiscus sinensis	PELSI04004		K7F0X4
			E	Capra hircus	CAPHI05769		A0A452FES6

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