Pairwise Orthologs for CAVPO10212

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CAVPO10212 (A0A286XK17)

E Cavia porcellus | G-protein coupled receptors family 1 profile domai [LOC100735664]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Branchiostoma floridae	BRAFL40917		A0A9J7HN50
			E	Branchiostoma lanceolatum	BRALA02280		BL26419
			E	Ictidomys tridecemlineatus	ICTTR09626		I3NCK4
			E	Macaca nemestrina	MACNE14679		A0A2K6AYJ8
			E	Colobus angolensis palliatus	COLAP00757		A0A2K5JCU1
			E	Rhinopithecus bieti	RHIBE43662		A0A2K6KX55
			E	Pan paniscus	PANPA08211		A0A2R8ZTU5
			E	Pan troglodytes	PANTR04619		A0A2J8N1T2
			E	Nomascus leucogenys	NOMLE09865		A0A2I3GCS8
			E	Callithrix jacchus	CALJA04902		A0A8I3WW03
			E	Propithecus coquereli	PROCO31963		A0A2K6GJH6
			E	Ursus americanus	URSAM31703		A0A452QLR1
			E	Suricata suricatta	SURSU36965		A0A673UT82
			E	Xenopus tropicalis	XENTR03704		A0A8J0QWB1
			E	Loxodonta africana	LOXAF06155		G3U4H5
			E	Loxodonta africana	LOXAF06156		G3UEE8
			E	Loxodonta africana	LOXAF06158		G3UDU8
			E	Loxodonta africana	LOXAF06159		G3SVU1
			E	Oryctolagus cuniculus	RABIT00512		ENSOCUG00000023133.1
			E	Oryctolagus cuniculus	RABIT00545		G1TVD8
			E	Heterocephalus glaber	HETGA21417		G5C595
			E	Heterocephalus glaber	HETGA21418		G5C596
			E	Heterocephalus glaber	HETGA21419		G5C597
			E	Octodon degus	OCTDE14597		A0A6P3F173
			E	Octodon degus	OCTDE14596		A0A6P3F1G1

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