Pairwise Orthologs for CAVPO02144

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CAVPO02144 (H0VFK9)

E Cavia porcellus | Coiled-coil domain containing 115 [CCDC115]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Acanthamoeba castellanii str. Neff	ACACA06244		L8H171
			E	Guillardia theta	GUITH21017		EKX51495
			E	Guillardia theta (strain CCMP2712)	GUITC04008		L1JTG8
			E	Xylona heveae (strain CBS 132557 / TC161)	XYLHT07875		A0A164ZMT8
			E	Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173)	PHANO11968		A0A7U2ERV7
			E	Mixia osmundae (strain CBS 9802 / IAM 14324 / JCM 22182 / KY 12970)	MIXOS05758		G7DSX7
			E	Batrachochytrium dendrobatidis	BATDE02978		fgenesh1_pg.C_scaffo
			E	Batrachochytrium dendrobatidis (strain JAM81 / FGSC 10211)	BATDJ02978		F4NRU0
			E	Rhizophagus irregularis (strain DAOM 197198w)	RHIIW05930		A0A015IP21
			E	Mucor circinelloides	MUCCI01952		Genemark1.2038_g
			E	Mucor circinelloides f. circinelloides (strain 1006PhL)	MUCC100487		S2KJ53
			E	Creolimax fragrantissima	CREFR05375		CFRG5375
			E	Branchiostoma floridae	BRAFL14606		A0A9J7MQV5
			E	Petromyzon marinus	PETMA08200		S4RPT3
			E	Lepisosteus oculatus	LEPOC00040		W5NAT6
			E	Anguilla anguilla	ANGAN44731		A0A9D3M0C1
			E	Anabas testudineus	ANATE20595		A0A3Q1JKC7
			E	Seriola dumerili	SERDU11386		A0A3B4UMP4
			E	Echeneis naucrates	ECHNA01138		A0A665U4Q5
			E	Cynoglossus semilaevis	CYNSE01304		A0A3P8UCM8
			E	Scophthalmus maximus	SCOMX02509		A0A2U9BZK8
			E	Dicentrarchus labrax	DICLA32257		XP_051281358
			E	Gasterosteus aculeatus	GASAC11730		G3P565
			E	Sparus aurata	SPAAU52283		A0A671W9M1
			E	Mola mola	MOLML25956		A0A3Q3WGE9

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