Pairwise Orthologs for CAVAP06250

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CAVAP06250 (ENSCAPG00000014513.1)

E Cavia aperea

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Echeneis naucrates	ECHNA23982		A0A665UBZ8
			E	Sparus aurata	SPAAU27049		A0A671YL15
			E	Salmo salar	SALSA100874		ENSSSAG00000059908.2
			E	Salmo trutta	SALTR101909		A0A674EQ39
			E	Sinocyclocheilus grahami	SINGR30265		A0A672SLA4
			E	Ornithorhynchus anatinus	ORNAN18325		A0A6I8PGX5
			E	Tachyglossus aculeatus	TACAU03937		XP_038599323
			E	Procavia capensis	PROCA13076		ENSPCAG00000000295
			E	Loxodonta africana	LOXAF15702		G3TJW5
			E	Echinops telfairi	ECHTE08745		ENSETEG00000017801
			E	Oryctolagus cuniculus	RABIT06741		NK2R_RABIT
			E	Ochotona princeps	OCHPR12406		ENSOPRG00000001798
			E	Dipodomys ordii	DIPOR08814		ENSDORG00000015619.2
			E	Fukomys damarensis	FUKDA03185		ENSFDAG00000002509.1
			E	Heterocephalus glaber	HETGA08901		ENSHGLG00100008475.1
			E	Cavia porcellus	CAVPO08664		NK2R_CAVPO
			E	Chinchilla lanigera	CHILA10489		A0A8C2W8H5
			E	Octodon degus	OCTDE01770		ENSODEG00000013359.1
			E	Jaculus jaculus	JACJA09275		A0A8C5LLT2
			E	Cricetulus griseus	CRIGR06701		A0A8C2MRT4
			E	Mus musculus	MOUSE00001		NK2R_MOUSE
			E	Rattus norvegicus	RATNO22099		NK2R_RAT
			E	Nannospalax galili	NANGA21612		A0A8C6Q9C8
			E	Ictidomys tridecemlineatus	ICTTR00304		ENSSTOG00000003412
			E	Cercocebus atys	CERAT10240		A0A2K5LBD6

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