Pairwise Orthologs for CARSF12686

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CARSF12686 (A0A1U7UJZ0)

E Carlito syrichta | Reversion-inducing cysteine-rich protein with Kaza [RECK]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Branchiostoma floridae	BRAFL24349		A0A9J7LT25
			E	Branchiostoma lanceolatum	BRALA20264		BL00366
			E	Petromyzon marinus	PETMA01309		S4R8F4
			E	Eptatretus burgeri	EPTBU25527		A0A8C4QS88
			E	Chiloscyllium punctatum	CHIPU00022		A0A401RN20
			E	Callorhinchus milii	CALMI23073		A0A4W3JCJ9
			E	Lepisosteus oculatus	LEPOC17445		W5MXF5
			E	Anabas testudineus	ANATE01719		ENSATEG00000018100.1
			E	Seriola dumerili	SERDU31416		A0A3B4URN0
			E	Echeneis naucrates	ECHNA38293		A0A665VVW3
			E	Cynoglossus semilaevis	CYNSE21197		A0A3P8V9F8
			E	Scophthalmus maximus	SCOMX18689		A0A8D3BZU7
			E	Dicentrarchus labrax	DICLA18351		A0A8C4E3K5
			E	Gasterosteus aculeatus	GASAC02149		G3N7G8
			E	Sparus aurata	SPAAU47179		A0A671X5Z7
			E	Mola mola	MOLML00336		A0A3Q3W6T9
			E	Takifugu rubripes	TAKRU00016		A0A674P4T3
			E	Tetraodon nigroviridis	TETNG19211		H3CMH2
			E	Oryzias javanicus	ORYJA26268		ENSOJAG00000023086.1
			E	Oryzias melastigma	ORYME32572		A0A3B3BT35
			E	Nothobranchius furzeri	NOTFU29562		A0A1A8USL2
			E	Kryptolebias marmoratus	KRYMA26914		A0A3Q3A4T1
			E	Cyprinodon variegatus	CYPVA26577		A0A3Q2E1L0
			E	Poecilia reticulata	POERE17337		A0A3P9PDB8
			E	Xiphophorus maculatus	XIPMA19049		A0A3B5PSN8

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