Pairwise Orthologs for CARSF03101

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CARSF03101 (A0A1U7UMY4)

E Carlito syrichta | Wiskott-Aldrich syndrome protein family member [WASF1]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			B	Myxococcales bacterium AS27yjCOA_137	U04MY03188		GYA21_08940
			B	Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8)	MYXSD06163		WP_015351776
			E	Entamoeba histolytica	ENTHI06790		A0A5K1V6X5
			E	Entamoeba histolytica (strain ATCC 30459 / HM-1:IMSS / ABRM)	ENTH107289		A0A5K1V6X5
			E	Exophiala mesophila	EXOME09694		A0A0D1Z2S7
			E	Penicillium chrysogenum	PENCH09373		gm1.9152_g
			E	Penicillium rubens (strain ATCC 28089 / DSM 1075 / NRRL 1951 / Wisconsin 54-1255)	PENRW06915		B6HEZ9
			E	Epicoccum nigrum	EPING08699		A0A1Y2LRF8
			E	Scytalidium lignicola	SCYLI02900		A0A3E2HJF5
			E	Neurospora tetrasperma (strain FGSC 2509 / P0656)	NEUT903302		G4UPG4
			E	Spathaspora passalidarum (strain NRRL Y-27907 / 11-Y1)	SPAPN05831		G3AV28
			E	Wolfiporia cocos (strain MD-104)	WOLCO01131		A0A2H3IX69
			E	Scyliorhinus torazame	SCYTO04328		A0A401NQU4
			E	Chiloscyllium punctatum	CHIPU06576		A0A401SCS3
			E	Callorhinchus milii	CALMI15063		A0A4W3JTF3
			E	Lepisosteus oculatus	LEPOC01064		W5NKN8
			E	Anguilla anguilla	ANGAN24837		XP_035277372
			E	Anabas testudineus	ANATE31514		A0A3Q1I9A4
			E	Seriola dumerili	SERDU01846		A0A3B4UZ47
			E	Echeneis naucrates	ECHNA31908		A0A665WPK1
			E	Scophthalmus maximus	SCOMX17557		A0A2U9CTW4
			E	Dicentrarchus labrax	DICLA17632		XP_051264401
			E	Gasterosteus aculeatus	GASAC07332		G3PCC6
			E	Sparus aurata	SPAAU62469		A0A671X3V1
			E	Mola mola	MOLML14280		A0A3Q3X6P8

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