Pairwise Orthologs for CAPHI22714

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CAPHI22714 (A0A452EDX4)

E Capra hircus | Mex-3 RNA binding family member A [MEX3A]

‹

Loading, please wait...

Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Anguilla anguilla	ANGAN31130		XP_035284434
			E	Anabas testudineus	ANATE07547		A0A3Q1IYY8
			E	Dicentrarchus labrax	DICLA14217		A0A8P4K4B7
			E	Kryptolebias marmoratus	KRYMA25806		A0A3Q3AWC6
			E	Poecilia formosa	POEFO16564		A0A087XZZ0
			E	Haplochromis burtoni	HAPBU09397		A0A3Q2WW36
			E	Neolamprologus brichardi	NEOBR21798		A0A3Q4GSP0
			E	Oreochromis aureus	OREAU49558		A0A668URY9
			E	Oreochromis niloticus	ORENI05381		I3J1V5
			E	Amphilophus citrinellus	AMPCI23438		A0A3Q0SKT2
			E	Hippocampus comes	HIPCM11645		A0A3Q2XLH6
			E	Gadus morhua	GADMO05637		A0A8C5ATP4
			E	Ictalurus punctatus	ICTPU18589		A0A2D0PNT3
			E	Danio rerio	DANRE11614		E7EXM9
			E	Latimeria chalumnae	LATCH10562		H3AV93
			E	Ornithorhynchus anatinus	ORNAN32790		A0A6I8PAV8
			E	Tachyglossus aculeatus	TACAU27548		XP_038624932
			E	Loxodonta africana	LOXAF09442		G3T3C0
			E	Oryctolagus cuniculus	RABIT03309		ENSOCUG00000005640.2
			E	Ochotona princeps	OCHPR09351		ENSOPRG00000002937
			E	Dipodomys ordii	DIPOR09318		ENSDORG00000002921.2
			E	Fukomys damarensis	FUKDA16802		ENSFDAG00000008485.1
			E	Heterocephalus glaber	HETGA16502		G5ARA2
			E	Cavia aperea	CAVAP04804		ENSCAPG00000011002.1
			E	Cavia porcellus	CAVPO06521		H0VWE5

Showing 1 to 25 of 25 rows rows per page