Pairwise Orthologs for CAPHI22296

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CAPHI22296 (A0A452EWD0)

E Capra hircus | Oviduct-specific glycoprotein [OVN]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Aspergillus brasiliensis (strain CBS 101740 / IMI 381727 / IBT 21946)	ASPBC09196		A0A1L9UC44
			E	Aspergillus aculeatus	ASPAC07803		e_gw1.13.323.1
			E	Aspergillus aculeatus (strain ATCC 16872 / CBS 172.66 / WB 5094)	ASPA107696		A0A1L9WNB4
			E	Aspergillus violaceofuscus (strain CBS 115571)	ASPV103461		A0A2V5HJ62
			E	Trichophyton rubrum (strain ATCC MYA-4607 / CBS 118892)	TRIRC08145		F2SWK5
			E	Cochliobolus sativus (strain ND90Pr / ATCC 201652)	COCSN09661		M2SUE9
			E	Cochliobolus lunatus	COCLU11458		fgenesh1_pg.22_#_9
			E	Fusarium oxysporum f. sp. cubense (strain race 1)	FUSC112493		N4ULC9
			E	Stachybotrys chlorohalonata (strain IBT 40285)	STAC402068		A0A084QQN1
			E	Pycnoporus cinnabarinus	PYCCI05490		A0A060S411
			E	Oryzias latipes	ORYLA14174		ENSORLG00000010585
			E	Mus musculus	MOUSE38754		OVGP1_MOUSE
			E	Bos indicus x Bos taurus	BOBOX08472		A0A4W2ESM1
			E	Bos taurus	BOVIN26269		A0A3S5ZPD7
			E	Ovis aries	SHEEP00654		W5QEA2
			E	Phascolarctos cinereus	PHACI20312		ENSPCIG00000027738.1
			E	Anolis carolinensis	ANOCA06459		ENSACAG00000027342
			E	Caenorhabditis brenneri	CAEBE20391		G0NAJ5
			E	Strongyloides ratti	STRRB01917		A0A090KUH2
			E	Ixodes scapularis	IXOSC14579		LOC115314660
			E	Hermetia illucens	HERIL14253		LOC119658258
			E	Culex quinquefasciatus	CULQU08080		B0WAN3
			E	Mercenaria mercenaria	MERMC11659		XP_045157004
			E	Pomacea canaliculata	POMCA00759		XP_025096896
			E	Biomphalaria pfeifferi	BIOPF01787		LOC101847165

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