Pairwise Orthologs for CAPHI06792

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CAPHI06792 (A0A452EH02)

E Capra hircus | F-box protein 2 [FBXO2]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Scyliorhinus torazame	SCYTO14840		A0A401P176
			E	Callorhinchus milii	CALMI22548		V9L393
			E	Cyprinodon variegatus	CYPVA06161		A0A3Q2DQF6
			E	Gambusia affinis	GAMAF11762		ENSGAFG00000004890.1
			E	Poecilia formosa	POEFO11152		A0A087XHF3
			E	Poecilia reticulata	POERE30269		A0A3P9N8T3
			E	Salarias fasciatus	SALFA40722		A0A672JFE6
			E	Oreochromis aureus	OREAU39306		A0A668REM7
			E	Latimeria chalumnae	LATCH07718		H3AA78
			E	Ornithorhynchus anatinus	ORNAN21081		A0A6I8P9Y8
			E	Tachyglossus aculeatus	TACAU06286		XP_038603312
			E	Procavia capensis	PROCA04585		ENSPCAG00000015638
			E	Loxodonta africana	LOXAF11392		G3TS52
			E	Echinops telfairi	ECHTE03108		ENSETEG00000000055
			E	Ochotona princeps	OCHPR13089		ENSOPRG00000012239
			E	Dipodomys ordii	DIPOR05960		ENSDORG00000008096.2
			E	Fukomys damarensis	FUKDA15717		ENSFDAG00000008080.1
			E	Heterocephalus glaber	HETGA00579		ENSHGLG00100013620.1
			E	Cavia porcellus	CAVPO12023		Q8VD40
			E	Chinchilla lanigera	CHILA18966		A0A8C2YMQ2
			E	Octodon degus	OCTDE18752		ENSODEG00000014000.1
			E	Jaculus jaculus	JACJA08986		A0A8C5KYB8
			E	Cricetulus griseus	CRIGR16189		ENSCGRG00000005805.1
			E	Mus musculus	MOUSE39685		FBX2_MOUSE
			E	Rattus norvegicus	RATNO33643		A0A8I6A9Y7

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