Pairwise Orthologs for CALMI43329

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CALMI43329 (A0A4W3HD95)

E Callorhinchus milii | ATP-dependent 6-phosphofructokinase [pfkp]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Talaromyces islandicus	TALIS05618		A0A0U1LZB2
			E	Botryotinia fuckeliana (strain B05.10)	BOTFB12076		BC1G_10994
			E	Branchiostoma floridae	BRAFL38126		A0A9J7HJ52
			E	Petromyzon marinus	PETMA05152		S4RQD3
			E	Scyliorhinus torazame	SCYTO12480		A0A401NGV0
			E	Chiloscyllium punctatum	CHIPU10369		A0A401SNM9
			E	Lepisosteus oculatus	LEPOC17456		W5MXU9
			E	Cynoglossus semilaevis	CYNSE21443		A0A3P8VWQ7
			E	Gasterosteus aculeatus	GASAC02538		G3NAI5
			E	Takifugu rubripes	TAKRU01436		A0A674NYQ6
			E	Gambusia affinis	GAMAF26404		ENSGAFG00000002240.1
			E	Xiphophorus maculatus	XIPMA19817		A0A3B5QY88
			E	Astatotilapia calliptera	ASTCA40487		A0A3P8PN48
			E	Oreochromis aureus	OREAU18542		A0A668UMH8
			E	Amphilophus citrinellus	AMPCI20110		A0A3Q0TH35
			E	Amphiprion percula	AMPPE00281		A0A3P8SY80
			E	Hippocampus comes	HIPCM23116		A0A3Q2YEN2
			E	Astyanax mexicanus	ASTMX02636		ENSAMXG00000018923
			E	Ictalurus punctatus	ICTPU14677		A0A979F397
			E	Latimeria chalumnae	LATCH10181		H3AZ82
			E	Ornithorhynchus anatinus	ORNAN04966		A0A6I8P7L8
			E	Tachyglossus aculeatus	TACAU15365		XP_038611922
			E	Procavia capensis	PROCA09006		ENSPCAG00000007739
			E	Echinops telfairi	ECHTE08884		ENSETEG00000000384
			E	Oryctolagus cuniculus	RABIT14388		ENSOCUG00000011039.3

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