Pairwise Orthologs for CALMI33155

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CALMI33155 (A0A4W3GAX5)

E Callorhinchus milii | Annexin [ANXA7]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Tieghemostelium lacteum	TIELA05060		A0A151ZJ58
			E	Aspergillus glaucus	ASPGL03109		fgenesh1_pm.7_#_150
			E	Penicillium patulum	PENPA01230		A0A135LHM2
			E	Talaromyces stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 / NRRL 1006)	TALSN03917		B8M4F7
			E	Leptosphaeria maculans (strain JN3 / isolate v23.1.3 / race Av1-4-5-6-7-8)	LEPMJ01251		E5ADB2
			E	Colletotrichum sublineola	COLSU02270		A0A066XDG3
			E	Cordyceps militaris (strain CM01)	CORMM08131		G3JNQ8
			E	Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719)	CHATD04454		G0SAF7
			E	Thermothelomyces thermophilus	THETO06666		Spoth1.fgenesh1_pm.6
			E	Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799)	MYCTT04168		G2QJI1
			E	Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565)	CRYNJ04178		Q5KH36
			E	Microbotryum lychnidis-dioicae (strain p1A1 Lamole / MvSl-1064)	USTV100279		U5GYK1
			E	Piromyces sp. (strain E2)	PIRSE05122		A0A1Y3NCX8
			E	Creolimax fragrantissima	CREFR05626		CFRG5626
			E	Branchiostoma lanceolatum	BRALA03898		BL18195
			E	Petromyzon marinus	PETMA01893		S4RBC9
			E	Chiloscyllium punctatum	CHIPU09468		A0A401SL10
			E	Lepisosteus oculatus	LEPOC13923		W5N0P7
			E	Amphiprion percula	AMPPE15742		A0A3P8TQT3
			E	Latimeria chalumnae	LATCH12737		H3AS54
			E	Ornithorhynchus anatinus	ORNAN17693		F6W7U8
			E	Tachyglossus aculeatus	TACAU03592		XP_038599519
			E	Loxodonta africana	LOXAF15746		G3SUG7
			E	Echinops telfairi	ECHTE06047		ENSETEG00000005734
			E	Oryctolagus cuniculus	RABIT06697		ENSOCUG00000012532.3

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