Pairwise Orthologs for CALMI29969

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CALMI29969 (A0A4W3IAG3)

E Callorhinchus milii | G-protein coupled receptors family 1 profile domai

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Scyliorhinus torazame	SCYTO02628		A0A401PKB5
			E	Lepisosteus oculatus	LEPOC04068		W5M1K1
			E	Anguilla anguilla	ANGAN41742		XP_035240395
			E	Anabas testudineus	ANATE18186		A0A3Q1H7G6
			E	Seriola dumerili	SERDU30233		A0A3B4UNT1
			E	Echeneis naucrates	ECHNA06571		A0A665U7Q9
			E	Cynoglossus semilaevis	CYNSE23136		A0A3P8WDI7
			E	Dicentrarchus labrax	DICLA08735		A0A8P4KTI7
			E	Sparus aurata	SPAAU16237		A0A671TYH4
			E	Mola mola	MOLML25527		A0A3Q3WTZ4
			E	Takifugu rubripes	TAKRU04580		H2SDA9
			E	Tetraodon nigroviridis	TETNG19461		H3C743
			E	Oryzias latipes	ORYLA03000		ENSORLG00000000344
			E	Oryzias melastigma	ORYME07633		A0A3B3DW04
			E	Nothobranchius furzeri	NOTFU09865		A0A1A8UC03
			E	Kryptolebias marmoratus	KRYMA30152		A0A3Q3FE29
			E	Cyprinodon variegatus	CYPVA25263		A0A3Q2E2R0
			E	Gambusia affinis	GAMAF29297		ENSGAFG00000018671.1
			E	Astatotilapia calliptera	ASTCA08311		A0A3P8PIA6
			E	Haplochromis burtoni	HAPBU14277		A0A3Q2VTW4
			E	Oreochromis aureus	OREAU36732		A0A668T4F1
			E	Oreochromis niloticus	ORENI15034		A0A669B6G1
			E	Amphilophus citrinellus	AMPCI23317		A0A3Q0QRG7
			E	Amphiprion ocellaris	AMPOC31633		A0A3Q1CC67
			E	Amphiprion percula	AMPPE31844		A0A3P8U210

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