Pairwise Orthologs for CALJA40318

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CALJA40318 (A0A8I3W9W1)

E Callithrix jacchus | alpha-1,2-Mannosidase [MAN1A2]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Pyronema omphalodes (strain CBS 100304)	PYROM01315		U4LK72
			E	Cordyceps confragosa	CORDF02410		A0A179IUP0
			E	Gibberella moniliformis (strain M3125 / FGSC 7600)	GIBM713552		FVEG_10032
			E	Pseudallescheria apiosperma	PSEDA05308		A0A084G6M8
			E	Eptatretus burgeri	EPTBU22758		A0A8C4WVR0
			E	Scyliorhinus torazame	SCYTO02845		A0A401PKY3
			E	Chiloscyllium punctatum	CHIPU05704		A0A401SAC2
			E	Callorhinchus milii	CALMI19634		A0A4W3GJC7
			E	Lepisosteus oculatus	LEPOC05968		W5MZ14
			E	Anabas testudineus	ANATE23618		A0A3Q1I8G4
			E	Seriola dumerili	SERDU03307		ENSSDUG00000014408.1
			E	Echeneis naucrates	ECHNA13783		A0A665X695
			E	Cynoglossus semilaevis	CYNSE10726		A0A3P8V3G7
			E	Scophthalmus maximus	SCOMX07421		A0A2U9CBY6
			E	Dicentrarchus labrax	DICLA13450		A0A8P4KLS8
			E	Gasterosteus aculeatus	GASAC11055		G3P024
			E	Sparus aurata	SPAAU27469		A0A671UD84
			E	Mola mola	MOLML04568		A0A3Q3XHA4
			E	Takifugu rubripes	TAKRU25612		A0A674MWP1
			E	Tetraodon nigroviridis	TETNG08825		H3DDZ0
			E	Oryzias javanicus	ORYJA41072		ENSOJAG00000018870.1
			E	Oryzias melastigma	ORYME32186		A0A3B3CDY4
			E	Nothobranchius furzeri	NOTFU22131		man1a2
			E	Kryptolebias marmoratus	KRYMA24459		A0A3Q3GD42
			E	Cyprinodon variegatus	CYPVA23798		A0A3Q2FWS8

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