Pairwise Orthologs for CALJA22403

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CALJA22403 (F7EY94)

E Callithrix jacchus | Interferon alpha/beta receptor 1 [IFNAR1]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Latimeria chalumnae	LATCH01316		H3A002
			E	Ornithorhynchus anatinus	ORNAN09070		F7AI21
			E	Tachyglossus aculeatus	TACAU25136		XP_038622202
			E	Procavia capensis	PROCA01905		ENSPCAG00000009608
			E	Loxodonta africana	LOXAF14504		G3TCH0
			E	Echinops telfairi	ECHTE07631		ENSETEG00000001679
			E	Oryctolagus cuniculus	RABIT15006		ENSOCUG00000014888.3
			E	Ochotona princeps	OCHPR03493		ENSOPRG00000003675
			E	Fukomys damarensis	FUKDA02873		ENSFDAG00000001203.1
			E	Heterocephalus glaber	HETGA08046		ENSHGLG00100008338.1
			E	Cavia porcellus	CAVPO17111		H0VGG3
			E	Chinchilla lanigera	CHILA01890		A0A8C2V5J8
			E	Jaculus jaculus	JACJA05299		A0A8C5KIY9
			E	Cricetulus griseus	CRIGR00863		ENSCGRG00000013645.1
			E	Mus musculus	MOUSE17665		INAR1_MOUSE
			E	Rattus norvegicus	RATNO04376		A6JLF6
			E	Ictidomys tridecemlineatus	ICTTR05738		ENSSTOG00000014989
			E	Cercocebus atys	CERAT16276		A0A2K5MYJ5
			E	Chlorocebus sabaeus	CHLSB07992		A0A0D9RBK9
			E	Macaca fascicularis	MACFA28544		Q4R727
			E	Macaca mulatta	MACMU32200		A0A5K1USE8
			E	Papio anubis	PAPAN30530		A0A096NZP7
			E	Colobus angolensis palliatus	COLAP37629		A0A2K5HSE3
			E	Gorilla gorilla gorilla	GORGO23078		A0A2I2YH23
			E	Homo sapiens	HUMAN58354		INAR1_HUMAN

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