Pairwise Orthologs for CALJA03952

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CALJA03952 (F6V1E3)

E Callithrix jacchus | exo-alpha-sialidase [NEU3]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			B	Maribacter sp. (strain HTCC2170 / KCCM 42371)	MARSH01238		FB2170_04925
			B	Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 / Mu 290)	PLAL203407		WP_013111691
			E	Emiliania huxleyi CCMP1516	EMIHU11953		R1EW69
			E	Petromyzon marinus	PETMA10472		S4RY94
			E	Scyliorhinus torazame	SCYTO14343		A0A401NPM1
			E	Lepisosteus oculatus	LEPOC10939		W5M2E5
			E	Anguilla anguilla	ANGAN34458		XP_035287741
			E	Anabas testudineus	ANATE06450		A0A3Q1IR56
			E	Seriola dumerili	SERDU12824		A0A3B4TZN9
			E	Echeneis naucrates	ECHNA44564		A0A665VG11
			E	Cynoglossus semilaevis	CYNSE15673		A0A3P8WXV2
			E	Scophthalmus maximus	SCOMX23993		ENSSMAG00000013071.1
			E	Dicentrarchus labrax	DICLA10403		A0A8P4FYJ6
			E	Gasterosteus aculeatus	GASAC19000		G3QBV3
			E	Sparus aurata	SPAAU21587		A0A671YSW3
			E	Mola mola	MOLML09646		A0A3Q3WUH2
			E	Takifugu rubripes	TAKRU11983		A7TVK4
			E	Tetraodon nigroviridis	TETNG12221		H3CXF4
			E	Oryzias javanicus	ORYJA12661		ENSOJAG00000010304.1
			E	Oryzias latipes	ORYLA04183		ENSORLG00000006953
			E	Oryzias melastigma	ORYME12251		A0A3B3B7F0
			E	Nothobranchius furzeri	NOTFU18061		A0A1A8UHR5
			E	Kryptolebias marmoratus	KRYMA21602		A0A3Q3AAP8
			E	Cyprinodon variegatus	CYPVA18053		A0A3Q2C600
			E	Gambusia affinis	GAMAF04591		A0A315VJL7

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