Pairwise Orthologs for CALJA03563

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CALJA03563 (F7IL89)

E Callithrix jacchus | protein-tyrosine-phosphatase [PTPRJ]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Branchiostoma lanceolatum	BRALA02156		BL19631
			E	Scyliorhinus torazame	SCYTO05328		A0A401P732
			E	Chiloscyllium punctatum	CHIPU18564		A0A401RPF9
			E	Callorhinchus milii	CALMI06237		A0A4W3I2U0
			E	Anabas testudineus	ANATE21899		ENSATEG00000019158.1
			E	Gasterosteus aculeatus	GASAC15666		G3PAL9
			E	Astyanax mexicanus	ASTMX00357		ENSAMXG00000016936
			E	Ictalurus punctatus	ICTPU06605		ENSIPUG00000005070.1
			E	Ornithorhynchus anatinus	ORNAN18530		A0A6I8N443
			E	Tachyglossus aculeatus	TACAU23460		XP_038621152
			E	Procavia capensis	PROCA10271		ENSPCAG00000008870
			E	Loxodonta africana	LOXAF12352		G3UHR3
			E	Echinops telfairi	ECHTE11037		ENSETEG00000002618
			E	Oryctolagus cuniculus	RABIT01237		ENSOCUG00000001933.3
			E	Ochotona princeps	OCHPR12742		ENSOPRG00000017161
			E	Dipodomys ordii	DIPOR17235		ENSDORG00000008291.2
			E	Fukomys damarensis	FUKDA02693		ENSFDAG00000006641.1
			E	Heterocephalus glaber	HETGA27714		ENSHGLG00100000767.1
			E	Cavia aperea	CAVAP14483		ENSCAPG00000007902.1
			E	Cavia porcellus	CAVPO19756		A0A286XHA0
			E	Chinchilla lanigera	CHILA06729		A0A8C2VYX7
			E	Octodon degus	OCTDE04661		ENSODEG00000016025.1
			E	Jaculus jaculus	JACJA08667		A0A8C5NXJ6
			E	Cricetulus griseus	CRIGR03247		ENSCGRG00000011801.1
			E	Mus musculus	MOUSE31635		E9Q4S7

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