Pairwise Orthologs for BOVIN34713

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene BOVIN34713 (A0AAA9SCC6)

E Bos taurus | Solute carrier family 39 member 14 [SLC39A14]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Acanthamoeba castellanii str. Neff	ACACA12536		L8GKF2
			E	Thecamonas trahens ATCC 50062	THETB05582		A0A0L0DD71
			E	Guillardia theta	GUITH01247		EKX31462
			E	Guillardia theta (strain CCMP2712)	GUITC24119		L1I5V6
			E	Branchiostoma lanceolatum	BRALA01909		BL17476
			E	Scyliorhinus torazame	SCYTO21291		A0A401QAJ9
			E	Chiloscyllium punctatum	CHIPU16747		A0A401T6T4
			E	Callorhinchus milii	CALMI37482		A0A4W3I2H0
			E	Lepisosteus oculatus	LEPOC00284		W5NEB4
			E	Anguilla anguilla	ANGAN35997		XP_035291718
			E	Anabas testudineus	ANATE12784		ENSATEG00000007546.1
			E	Seriola dumerili	SERDU25421		A0A3B4V335
			E	Echeneis naucrates	ECHNA20969		A0A665TWH3
			E	Cynoglossus semilaevis	CYNSE32150		A0A3P8X3D5
			E	Scophthalmus maximus	SCOMX33483		A0A2U9BVF9
			E	Dicentrarchus labrax	DICLA30112		A0A8C4DUL3
			E	Gasterosteus aculeatus	GASAC14876		G3PMU6
			E	Sparus aurata	SPAAU12674		A0A671U4X6
			E	Mola mola	MOLML12966		A0A3Q3WUF1
			E	Takifugu rubripes	TAKRU31430		A0A6D2WCJ4
			E	Tetraodon nigroviridis	TETNG02926		H3DD26
			E	Oryzias javanicus	ORYJA42144		ENSOJAG00000001021.1
			E	Oryzias latipes	ORYLA19814		ENSORLG00000019904
			E	Oryzias melastigma	ORYME31709		A0A3B3DAI3
			E	Nothobranchius furzeri	NOTFU17780		A0A1A8U668

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