Pairwise Orthologs for BOVIN31651

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene BOVIN31651 (A0A140T897)

E Bos taurus | Albumin [ALB]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Latimeria chalumnae	LATCH02400		H3A4E6
			E	Ornithorhynchus anatinus	ORNAN01816		A0A6I8MZS2
			E	Tachyglossus aculeatus	TACAU18420		XP_038615066
			E	Procavia capensis	PROCA06852		ENSPCAG00000001252
			E	Loxodonta africana	LOXAF10423		G3SMX8
			E	Echinops telfairi	ECHTE05037		ENSETEG00000013839
			E	Oryctolagus cuniculus	RABIT05335		G1U9S2
			E	Ochotona princeps	OCHPR11188		ENSOPRG00000002121
			E	Dipodomys ordii	DIPOR10000		ENSDORG00000002808.2
			E	Fukomys damarensis	FUKDA19483		ENSFDAG00000021157.1
			E	Heterocephalus glaber	HETGA18917		ENSHGLG00100010842.1
			E	Cavia aperea	CAVAP12284		ENSCAPG00000009394.1
			E	Cavia porcellus	CAVPO16731		Q6WDN9
			E	Octodon degus	OCTDE24051		A0A6P3FUI6
			E	Jaculus jaculus	JACJA16989		A0A8C5K0T6
			E	Cricetulus griseus	CRIGR22551		ENSCGRG00000005577.1
			E	Mus musculus	MOUSE45529		ALBU_MOUSE
			E	Rattus norvegicus	RATNO07966		A0A8I5Y4N3
			E	Nannospalax galili	NANGA09458		A0A8C6QPG5
			E	Ictidomys tridecemlineatus	ICTTR02334		ENSSTOG00000012585
			E	Cercocebus atys	CERAT35998		A0A2K5MVX4
			E	Chlorocebus sabaeus	CHLSB16417		A0A0D9QXP9
			E	Macaca fascicularis	MACFA33958		G7P5L7
			E	Macaca mulatta	MACMU35866		F7HCH0
			E	Macaca nemestrina	MACNE18191		A0A2K6E6L0

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