Pairwise Orthologs for BOVIN21616

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene BOVIN21616 (E1BJQ9)

E Bos taurus | Triacylglycerol lipase [PNLIP]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Callorhinchus milii	CALMI40338		A0A4W3JJE3
			E	Astyanax mexicanus	ASTMX02774		A0A8B9L0W5
			E	Pygocentrus nattereri	PYGNA02968		A0A3B4ERR1
			E	Electrophorus electricus	ELEEL03028		A0A4W4EBY4
			E	Latimeria chalumnae	LATCH13794		H3A467
			E	Tachyglossus aculeatus	TACAU17625		XP_038614541
			E	Procavia capensis	PROCA10772		ENSPCAG00000014898
			E	Loxodonta africana	LOXAF15407		G3TD62
			E	Echinops telfairi	ECHTE07599		ENSETEG00000019670
			E	Fukomys damarensis	FUKDA05716		A0A091DA07
			E	Cavia porcellus	CAVPO00710		H0VNP7
			E	Chinchilla lanigera	CHILA09265		A0A8C2VSZ7
			E	Jaculus jaculus	JACJA10943		A0A8C5JYL8
			E	Mus musculus	MOUSE25182		LIPP_MOUSE
			E	Rattus norvegicus	RATNO18737		A6JI64
			E	Nannospalax galili	NANGA21567		A0A8C6QCW5
			E	Ictidomys tridecemlineatus	ICTTR03833		LIPP_ICTTR
			E	Cercocebus atys	CERAT13249		A0A2K5LJR0
			E	Chlorocebus sabaeus	CHLSB18140		A0A0D9QXS3
			E	Macaca fascicularis	MACFA43467		A0A2K5TZ93
			E	Macaca mulatta	MACMU46747		F7HM08
			E	Macaca nemestrina	MACNE27531		A0A2K6D3U6
			E	Mandrillus leucophaeus	MANLE04728		A0A2K5ZRA1
			E	Papio anubis	PAPAN04079		A0A8I5N2S9
			E	Colobus angolensis palliatus	COLAP07829		A0A2K5JCX1

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