Pairwise Orthologs for ATHCN00439

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene ATHCN00439 (A0A663LWW7)

E Athene cunicularia | Phosphatidylinositol 5-phosphate 4-kinase type-2 a [PIP4K2A]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Bodo saltans	BODSA15697		A0A0S4IZA7
			E	Leptomonas seymouri	LEPSE02681		A0A0N1PE70
			E	Candida tenuis	CANTE01452		estExt0_Genewise2Plu
			E	Nosema bombycis (strain CQ1 / CVCC 102059)	NOSB102224		R0KPM8
			E	Scyliorhinus torazame	SCYTO08950		A0A401PGF8
			E	Chiloscyllium punctatum	CHIPU00117		A0A401RS15
			E	Callorhinchus milii	CALMI09756		A0A4W3GVD5
			E	Lepisosteus oculatus	LEPOC17551		W5N1P7
			E	Anabas testudineus	ANATE01627		ENSATEG00000015222.1
			E	Seriola dumerili	SERDU20684		A0A3B4TFU5
			E	Echeneis naucrates	ECHNA38536		A0A665WDL1
			E	Cynoglossus semilaevis	CYNSE21206		A0A3P8VD55
			E	Scophthalmus maximus	SCOMX18421		ENSSMAG00000018548.1
			E	Dicentrarchus labrax	DICLA18771		A0A8P4K6B4
			E	Gasterosteus aculeatus	GASAC02655		G3ND46
			E	Sparus aurata	SPAAU46741		A0A671WBN8
			E	Mola mola	MOLML00109		A0A3Q4ANM6
			E	Takifugu rubripes	TAKRU02261		A0A674PPZ6
			E	Oryzias javanicus	ORYJA26404		A0A3S2MGX2
			E	Oryzias latipes	ORYLA09020		ENSORLG00000007181
			E	Oryzias melastigma	ORYME19810		A0A3B3C3L1
			E	Nothobranchius furzeri	NOTFU13632		pip4k2a
			E	Kryptolebias marmoratus	KRYMA19056		A0A3Q3GB67
			E	Cyprinodon variegatus	CYPVA16491		A0A3Q2CLE2
			E	Gambusia affinis	GAMAF08135		ENSGAFG00000009376.1

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