Pairwise Orthologs for ASTRU12262

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene ASTRU12262 (XP_033635992)

E Asterias rubens

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			B	Halobacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ)	HALMS02032		WP_014244752
			E	Acanthamoeba castellanii str. Neff	ACACA09735		L8GT15
			E	Tieghemostelium lacteum	TIELA03019		A0A152A9C2
			E	Trypanosoma vivax (strain Y486)	TRYVY17623		G0U927
			E	Naegleria gruberi strain NEG-M	NAEGR01999		D2V1B0
			E	Monosiga brevicollis	MONBE06171		A9URR4
			E	Endocarpon pusillum (strain Z07020 / HMAS-L-300199)	ENDPU07123		U1GVB8
			E	Penicillium italicum	PENIT04160		A0A0A2LGB2
			E	Ajellomyces dermatitidis (strain ER-3 / ATCC MYA-2586)	AJEDR07248		BDCG_05984
			E	Ajellomyces capsulatus (strain H143)	AJECH06696		C6HKG5
			E	Aureobasidium pullulans	AURPU05658		fgenesh1_pg.10_#_247
			E	Aureobasidium subglaciale (strain EXF-2481)	AURSE05383		A0A074YCL3
			E	Dothistroma septosporum (strain NZE10 / CBS 128990)	DOTSN07456		M2WND5
			E	Passalora fulva	PASFU10888		A0A9Q8P9R6
			E	Sphaerulina musiva (strain SO2202)	SPHMS05532		M3D4X2
			E	Alternaria alternata	ALTAL04391		A0A177DPS4
			E	Cochliobolus heterostrophus (strain C5 / ATCC 48332 / race O)	COCH500842		M2VC02
			E	Cochliobolus sativus (strain ND90Pr / ATCC 201652)	COCSN03963		M2TD07
			E	Cochliobolus lunatus	COCLU06307		fgenesh1_pg.10_#_173
			E	Pyrenophora tritici-repentis (strain Pt-1C-BFP)	PYRTR00174		B2VRR2
			E	Verticillium alfalfae (strain VaMs.102 / ATCC MYA-4576 / FGSC 10136)	VERA103688		C9SG60
			E	Verticillium dahliae	VERDA04404		A0A2J8F735
			E	Verticillium dahliae (strain VdLs.17 / ATCC MYA-4575 / FGSC 10137)	VERDV01408		A0A2J8F735
			E	Fusarium poae	FUSPO07120		A0A1B8ATJ3
			E	Stachybotrys chlorohalonata (strain IBT 40285)	STAC408853		A0A084R235

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