Pairwise Orthologs for ASTMX15574

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene ASTMX15574 (A0A8T2MI66)

E Astyanax mexicanus | Probable UDP-sugar transporter protein SLC35A4 [SLC35A4]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Thecamonas trahens ATCC 50062	THETB01715		A0A0L0DTC3
			E	Bodo saltans	BODSA11764		A0A0S4JKR6
			E	Trypanosoma rangeli	TRYRA02906		A0A422NRC3
			E	Emiliania huxleyi CCMP1516	EMIHU08406		R1E0E8
			E	Salpingoeca rosetta (strain ATCC 50818 / BSB-021)	SALR501059		F2TYA2
			E	Capsaspora owczarzaki (strain ATCC 30864)	CAPO304901		A0A0D2U4X2
			E	Rhizophagus irregularis (strain DAOM 197198w)	RHIIW19718		A0A015MNK3
			E	Branchiostoma floridae	BRAFL04141		A0A9J7KFN8
			E	Scyliorhinus torazame	SCYTO17669		A0A401Q2Q5
			E	Chiloscyllium punctatum	CHIPU16317		A0A401T5J6
			E	Callorhinchus milii	CALMI29138		A0A4W3JEE8
			E	Lepisosteus oculatus	LEPOC15040		W5NP48
			E	Anguilla anguilla	ANGAN10358		XP_035267352
			E	Anabas testudineus	ANATE25146		A0A3Q1JAC5
			E	Seriola dumerili	SERDU27474		A0A3B4TGG6
			E	Echeneis naucrates	ECHNA28588		A0A665U1A6
			E	Cynoglossus semilaevis	CYNSE09722		A0A3P8VMV9
			E	Scophthalmus maximus	SCOMX05683		ENSSMAG00000002803.1
			E	Dicentrarchus labrax	DICLA27069		XP_051275558
			E	Gasterosteus aculeatus	GASAC20939		G3Q1Q3
			E	Sparus aurata	SPAAU64487		A0A671WLR5
			E	Mola mola	MOLML10786		A0A3Q3VS24
			E	Takifugu rubripes	TAKRU10137		H2SPA4
			E	Tetraodon nigroviridis	TETNG00040		H3D9Q1
			E	Oryzias javanicus	ORYJA34658		ENSOJAG00000017565.1

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