Pairwise Orthologs for ASTMX10588

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene ASTMX10588 (ENSAMXG00000011763)

E Astyanax mexicanus

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Acanthamoeba castellanii str. Neff	ACACA02746		L8HCW4
			E	Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500)	POLPP03314		D3BJZ6
			E	Cavenderia fasciculata (strain SH3)	CAVFA00295		F4PSX1
			E	Dictyostelium discoideum	DICDI00423		SPTC1_DICDI
			E	Dictyostelium purpureum	DICPU08748		F0ZW55
			E	Tieghemostelium lacteum	TIELA08674		A0A151Z6A8
			E	Thecamonas trahens ATCC 50062	THETB03469		A0A0L0D558
			E	Guillardia theta	GUITH03349		EKX33501
			E	Guillardia theta (strain CCMP2712)	GUITC21956		L1IB58
			E	Leishmania donovani (strain BPK282A1)	LEIDB01581		E9BRF1
			E	Leishmania infantum	LEIIN01942		A0A6L0XZL6
			E	Leishmania major strain Friedlin	LEIMA05912		Q6XFB3
			E	Trypanosoma rangeli	TRYRA07679		A0A3R7KRA6
			E	Naegleria gruberi strain NEG-M	NAEGR15230		D2W1X2
			E	Giardia intestinalis (strain ATCC 50803 / WB clone C6)	GIAIC02972		A8BGL2
			E	Anaeramoeba ignava	ANAIG11871		A0A9Q0LAU0
			E	Monosiga brevicollis	MONBE07691		A9VBG2
			E	Salpingoeca rosetta (strain ATCC 50818 / BSB-021)	SALR508485		F2UJI9
			E	Capsaspora owczarzaki (strain ATCC 30864)	CAPO307702		XP_004344499
			E	Neolecta irregularis (strain DAH-3)	NEOID02021		A0A1U7LTA3
			E	Pneumocystis murina (strain B123)	PNEMU00229		M7PLY9
			E	Schizosaccharomyces cryophilus (strain OY26 / ATCC MYA-4695 / CBS 11777 / NBRC 106824 / NRRL Y48691)	SCHCR04787		S9VU35
			E	Schizosaccharomyces japonicus (strain yFS275 / FY16936)	SCHJY03100		B6K650
			E	Schizosaccharomyces octosporus (strain yFS286)	SCHOY01623		S9Q5V3
			E	Schizosaccharomyces pombe (strain 972 / ATCC 24843)	SCHPO03120		SPTC1_SCHPO

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