Pairwise Orthologs for ASTMX05889

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene ASTMX05889 (A0A8B9JWH9)

E Astyanax mexicanus | Polypeptide N-acetylgalactosaminyltransferase

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Chiloscyllium punctatum	CHIPU04631		A0A401S7D4
			E	Callorhinchus milii	CALMI39143		A0A4W3IQY6
			E	Lepisosteus oculatus	LEPOC08811		W5M8R9
			E	Anguilla anguilla	ANGAN42511		XP_035242231
			E	Anabas testudineus	ANATE18329		ENSATEG00000006748.1
			E	Seriola dumerili	SERDU16680		A0A3B4T7M3
			E	Echeneis naucrates	ECHNA06320		A0A665TY29
			E	Cynoglossus semilaevis	CYNSE22509		A0A3P8V4R6
			E	Scophthalmus maximus	SCOMX21937		A0A2U9B3U8
			E	Dicentrarchus labrax	DICLA08384		A0A8P4G755
			E	Sparus aurata	SPAAU17718		A0A671WIG6
			E	Mola mola	MOLML07784		A0A3Q3VUM6
			E	Takifugu rubripes	TAKRU04266		A0A674NSU3
			E	Tetraodon nigroviridis	TETNG05819		H3DNT8
			E	Oryzias javanicus	ORYJA08098		A0A3S2PZ57
			E	Oryzias latipes	ORYLA03064		ENSORLG00000001357
			E	Oryzias melastigma	ORYME07519		A0A3B3DZY7
			E	Nothobranchius furzeri	NOTFU09780		A0A9D2YCV6
			E	Kryptolebias marmoratus	KRYMA25264		A0A3Q3BJW4
			E	Cyprinodon variegatus	CYPVA22402		A0A3Q2D180
			E	Gambusia affinis	GAMAF30222		ENSGAFG00000003552.1
			E	Poecilia formosa	POEFO06288		A0A087YDS0
			E	Poecilia reticulata	POERE07007		A0A3P9Q101
			E	Xiphophorus maculatus	XIPMA13365		M4AFN3
			E	Salarias fasciatus	SALFA47156		A0A672IHJ1

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