Pairwise Orthologs for ASTMX03366

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene ASTMX03366 (ENSAMXG00000008527)

E Astyanax mexicanus

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Scyliorhinus torazame	SCYTO01882		A0A401PGK5
			E	Chiloscyllium punctatum	CHIPU08942		A0A401SJK9
			E	Callorhinchus milii	CALMI15434		A0A4W3JG90
			E	Lepisosteus oculatus	LEPOC06968		W5MH61
			E	Anguilla anguilla	ANGAN37422		XP_035291363
			E	Anabas testudineus	ANATE12071		ENSATEG00000005600.1
			E	Seriola dumerili	SERDU06268		A0A3B4UPX0
			E	Echeneis naucrates	ECHNA22694		A0A665WXY2
			E	Scophthalmus maximus	SCOMX32669		A0A6A4SRY9
			E	Dicentrarchus labrax	DICLA28968		A0A8P4GGG2
			E	Gasterosteus aculeatus	GASAC14417		G3P5L8
			E	Sparus aurata	SPAAU14245		A0A671VRM9
			E	Mola mola	MOLML13295		A0A3Q3XJU9
			E	Takifugu rubripes	TAKRU29488		A0A674NSI6
			E	Tetraodon nigroviridis	TETNG02874		H3DD76
			E	Oryzias javanicus	ORYJA44287		A0A3S2MW59
			E	Oryzias latipes	ORYLA17650		ENSORLG00000008678
			E	Oryzias melastigma	ORYME11016		A0A3B3BDQ6
			E	Nothobranchius furzeri	NOTFU27608		A0A1A8AKF2
			E	Kryptolebias marmoratus	KRYMA08721		A0A3Q3ALM8
			E	Cyprinodon variegatus	CYPVA05877		A0A3Q2E519
			E	Gambusia affinis	GAMAF12591		ENSGAFG00000012041.1
			E	Poecilia formosa	POEFO09420		A0A087YGT2
			E	Poecilia reticulata	POERE33814		A0A3P9N171
			E	Xiphophorus maculatus	XIPMA03373		A0A3B5Q5V1

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