Pairwise Orthologs for ARATH18837

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene ARATH18837 (Q0WRG4)

E Arabidopsis thaliana | At3g11290 | Myb/SANT-like DNA-binding domain protein [F11B9.20]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Amborella trichopoda	AMBTC23292		W1NFP2
			E	Triticum aestivum	WHEAT114241		A0A3B6RAF3
			E	Triticum urartu	TRIUA00946		TRIUR3_32366
			E	Tetracentron sinense	TETSI20797		A0A834YUJ2
			E	Cucumis sativus	CUCSA14968		A0A0A0KKV6
			E	Brassica rapa subsp. pekinensis	BRARP03811		M4EZD1
			E	Brassica oleracea var. oleracea	BRAOL04719		A0A0D3AEH6
			E	Eutrema salsugineum	EUTSA23954		V4NQM3
			E	Theobroma cacao	THECC18995		A0A061F9F7
			E	Macadamia integrifolia	MACIN05902		XP_042493824
			E	Macadamia integrifolia	MACIN38561		XP_042483165
			E	Macadamia integrifolia	MACIN44531		XP_042489876
			E	Helianthus annuus	HELAN16494		A0A251SMC9
			E	Helianthus annuus	HELAN39480		A0A251UPV8
			E	Brassica napus	BRANA02990		A0A078HEX2
			E	Brassica napus	BRANA03005		A0A078HEW0
			E	Gossypium arboreum	GOSAR27885		LOC108451137
			E	Gossypium arboreum	GOSAR10971		XP_017628295
			E	Gossypium arboreum	GOSAR21731		LOC108484950
			E	Gossypium arboreum	GOSAR34687		XP_017613593
			E	Gossypium arboreum	GOSAR05898		LOC108468334
			E	Gossypium arboreum	GOSAR17648		LOC108481166
			E	Gossypium arboreum	GOSAR34175		XP_017613479
			E	Gossypium arboreum	GOSAR22885		LOC108485200
			E	Gossypium arboreum	GOSAR40822		XP_017621043

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