Pairwise Orthologs for ARAAL11768

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene ARAAL11768 (A0A087H003)

E Arabis alpina | Time for coffee

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Cochliobolus heterostrophus (strain C5 / ATCC 48332 / race O)	COCH507199		M2U6L7
			E	Dicentrarchus labrax	DICLA30811		A0A8P4GKA7
			E	Haliaeetus leucocephalus	HALLE08070		XP_010564212
			E	Phasianus colchicus	PHACC13469		A0A669PZY6
			E	Parus major	PARMJ05789		ENSPMJG00000000725.1
			E	Tyto alba	TYTAL30351		XP_042659408
			E	Asterias rubens	ASTRU19496		XP_033645235
			E	Biomphalaria pfeifferi	BIOPF14458		LOC118477982
			E	Haliotis rufescens	HALRU08570		PoB_000857000
			E	Kalanchoe fedtschenkoi	KALFE36252		A0A7N0SYF7
			E	Cajanus cajan	CAJCA28807		A0A151RL83
			E	Phaseolus vulgaris	PHAVU06061		V7CYR1
			E	Phaseolus angularis	PHAAN13078		A0A0L9T3E6
			E	Quercus lobata	QUELO02832		A0A7N2N2V9
			E	Prunus dulcis	PRUDU04608		A0A5E4EDS9
			E	Prunus persica	PRUPE05504		EMJ00877
			E	Rosa chinensis	ROSCH15319		A0A2P6PW25
			E	Brassica rapa subsp. pekinensis	BRARP14005		M4FH58
			E	Brassica oleracea var. oleracea	BRAOL22042		A0A0D3BW41
			E	Arabidopsis lyrata	ARALY19673		fgenesh2_kg.5__2812_
			E	Arabidopsis thaliana	ARATH25106		F4J0W8
			E	Eutrema salsugineum	EUTSA27645		V4LJ48
			E	Theobroma cacao	THECC02786		A0A061DPY4
			E	Corchorus capsularis	COCAP04171		A0A1R3I538
			E	Gossypium arboreum	GOSAR33975		A0A0B0PXA9

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