Pairwise Orthologs for AMPOC18513

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene AMPOC18513 (A0A3Q1C6Y2)

E Amphiprion ocellaris | P2Y receptor family member 8 [P2RY8]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Eptatretus burgeri	EPTBU16964		A0A8C4QLS5
			E	Scyliorhinus torazame	SCYTO13070		A0A401NSI3
			E	Chiloscyllium punctatum	CHIPU09827		A0A401SM49
			E	Callorhinchus milii	CALMI12154		A0A4W3K486
			E	Lepisosteus oculatus	LEPOC05505		W5NML6
			E	Anguilla anguilla	ANGAN50837		XP_035249134
			E	Anabas testudineus	ANATE23749		A0A3Q1HL92
			E	Seriola dumerili	SERDU03166		A0A3B4U6P0
			E	Echeneis naucrates	ECHNA12930		A0A665VLX2
			E	Cynoglossus semilaevis	CYNSE10814		A0A3P8V483
			E	Scophthalmus maximus	SCOMX07279		ENSSMAG00000003947.1
			E	Dicentrarchus labrax	DICLA13212		XP_051260614
			E	Gasterosteus aculeatus	GASAC10439		G3NB71
			E	Sparus aurata	SPAAU27427		A0A671U1M0
			E	Mola mola	MOLML04693		A0A3Q3XCD3
			E	Takifugu rubripes	TAKRU25774		H2U6F1
			E	Tetraodon nigroviridis	TETNG08332		H3DBX8
			E	Oryzias javanicus	ORYJA40877		A0A437C6K8
			E	Oryzias latipes	ORYLA09485		ENSORLG00000010906
			E	Oryzias melastigma	ORYME14135		A0A3B3C6S3
			E	Nothobranchius furzeri	NOTFU22267		A0A8C6MDU4
			E	Kryptolebias marmoratus	KRYMA06395		A0A3Q3EVZ2
			E	Cyprinodon variegatus	CYPVA15986		A0A3Q2EID1
			E	Gambusia affinis	GAMAF06012		A0A315W6P8
			E	Poecilia formosa	POEFO03531		A0A087Y5L5

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