Pairwise Orthologs for AILME11166

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene AILME11166 (ENSAMEG00000005456)

E Ailuropoda melanoleuca

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			A	Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / JCM 9101 / NCIMB 13204 / VKM B-1734 / 4k)	HALTV03453		WP_012944610
			B	Gloeothece verrucosa (strain PCC 7822)	GLOV702418		WP_013322581
			B	Clostridium novyi (strain NT)	CLONN01809		NT01CX_0300
			B	Candidatus Latescibacteria bacterium UWMA-0219	UC09700873		EYP53_04465
			B	Phaeobacter inhibens (strain DSM 17395)	PHAIB03008		WP_014881248
			B	Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)	KLEP702766		KPN78578_27810
			B	Klebsiella pneumoniae subsp. pneumoniae (strain HS11286)	KLEPH03876		KPHS_39060
			E	Heterobasidion annosum	HETAN08389		e_gw1.4.189.1
			E	Ornithorhynchus anatinus	ORNAN07135		F6UW23
			E	Procavia capensis	PROCA04050		ENSPCAG00000014769
			E	Loxodonta africana	LOXAF01098		G5E791
			E	Oryctolagus cuniculus	RABIT17171		ENSOCUG00000000865.3
			E	Cavia porcellus	CAVPO25577		H0VT83
			E	Chinchilla lanigera	CHILA20590		A0A8C2UIL4
			E	Rattus norvegicus	RATNO24329		Q32KK0
			E	Ictidomys tridecemlineatus	ICTTR18361		ENSSTOG00000011687
			E	Cercocebus atys	CERAT03891		A0A2K5NXP0
			E	Chlorocebus sabaeus	CHLSB18249		A0A0D9RSX2
			E	Macaca fascicularis	MACFA43743		A0A2K5WPC6
			E	Macaca mulatta	MACMU47062		F7ATU5
			E	Macaca nemestrina	MACNE09296		A0A2K6D7V8
			E	Mandrillus leucophaeus	MANLE13314		A0A2K6AC23
			E	Papio anubis	PAPAN00264		A0A2I3MHG1
			E	Colobus angolensis palliatus	COLAP39317		A0A2K5JQ48
			E	Rhinopithecus bieti	RHIBE40447		A0A2K6M3J6

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