Sequences for VULVU19035

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Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene VULVU19035 (A0A3Q7SZI4)

E Vulpes vulpes | 5'(3')-deoxyribonucleotidase, mitochondrial isofor [NT5M]

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Orthologs 191

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 115
Gene information
GO Annotations
Sequences/Isoforms 2
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	VULVU19036	181			4	ENSVVUG00000030141.1
	VULVU19035 reference isoform	187			5	A0A3Q7SZI4

Protein Sequence

Download: Fasta

MDGVLADFEG GFLRKFRARF PDQPFIALED RRGFWLSEQY GLLQPGLSEK AISIWESENF    60
FLDLEPLPGA VEAVKQMANL ENTHVFICTS PIKMYKYCPY EKYAWVEKHF GPDFLDQIVL   120
STDKTVVSAD LLIDDRPDIT GAEPNPSWEH ILFTACHNRH LQLPRPGRRL HSWADDWKAI   180
LDSKRPR                                                             187

cDNA Sequence

Download: Fasta

ATGGACGGCG TGTTGGCCGA CTTCGAGGGC GGCTTCCTCA GGAAGTTCCG CGCGCGCTTC    60
CCCGACCAGC CCTTCATCGC GCTGGAGGAC CGGCGCGGCT TCTGGTTGTC GGAGCAGTAC   120
GGCCTCCTGC AGCCCGGCCT GAGCGAGAAG GCCATTAGCA TATGGGAATC AGAAAATTTC   180
TTTCTTGACC TGGAGCCTCT ACCAGGGGCT GTAGAAGCTG TGAAGCAGAT GGCCAACCTA   240
GAAAACACCC ATGTCTTCAT CTGCACGAGC CCCATCAAGA TGTACAAGTA CTGTCCCTAT   300
GAGAAGTATG CCTGGGTGGA GAAGCACTTT GGTCCTGACT TTCTGGATCA GATTGTACTG   360
TCCACAGACA AGACCGTGGT CTCTGCTGAC CTTCTTATAG ACGACCGGCC AGACATCACA   420
GGGGCCGAGC CGAACCCCAG CTGGGAGCAC ATCCTCTTCA CAGCCTGCCA CAACCGGCAC   480
CTGCAGCTGC CGCGCCCCGG CCGCAGGCTG CACTCGTGGG CCGATGACTG GAAGGCCATT   540
CTGGACAGCA AGCGGCCCCG CTGA                                          564