Sequences for URSMA28939

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Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene URSMA28939 (A0A384BGJ6)

E Ursus maritimus | C-type lectin domain family 4 member E [LOC103656167]

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Orthologs 191

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 25
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	URSMA28939 reference isoform	212			6	A0A384BGJ6

Protein Sequence

Download: Fasta

MNSSQPSTSQ GTEKGCLSSQ VLLWTVAGVS MLLLSACFIT RCVVTYRVFQ LCDENKFQLH    60
EAFMDFSCSN DGSGSVKNCC PSDWVHFQSS CYFFSTNTMS WASSLKNCSD MGAHLVVINT   120
QEEQEFLFFA KPKRREFYIG LTDQVTEGQW QWVDGTPFSE SLSFWDVGEP NNIVTVEDCA   180
TIRDSSNPKK NWNDVPCFFN MFRVCEMPEI NV                                 212

cDNA Sequence

Download: Fasta

ATGAATTCAT CCCAACCATC TACATCACAA GGCACAGAGA AAGGATGCTT GTCTTCCCAA    60
GTGCTCTTAT GGACTGTTGC TGGGGTCTCC ATGCTACTGC TCAGCGCCTG TTTCATCACC   120
AGATGTGTTG TGACATATCG TGTCTTTCAA CTCTGTGATG AGAATAAGTT CCAGCTACAT   180
GAGGCGTTCA TGGACTTCTC CTGCTCCAAT GATGGATCGG GTTCAGTCAA GAATTGCTGT   240
CCATCAGACT GGGTACATTT TCAATCTAGC TGCTACTTCT TTTCTACTAA CACCATGTCC   300
TGGGCATCAA GTTTAAAAAA CTGCTCCGAC ATGGGAGCTC ATCTGGTTGT TATCAACACA   360
CAGGAGGAGC AGGAATTCCT TTTCTTTGCG AAACCTAAAA GGAGAGAGTT CTATATTGGA   420
CTGACAGACC AGGTGACCGA GGGTCAGTGG CAATGGGTAG ACGGAACACC TTTCTCAGAG   480
TCTCTGAGCT TCTGGGATGT CGGGGAGCCC AATAATATAG TGACAGTGGA GGACTGTGCC   540
ACCATCCGAG ACTCTTCGAA TCCCAAGAAA AATTGGAATG ATGTGCCCTG TTTCTTCAAT   600
ATGTTTCGGG TTTGTGAAAT GCCAGAAATA AATGTTTAA                          639