Sequences for URSAM25793

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene URSAM25793 (A0A452R7A8)

E Ursus americanus | F-box protein 17 [FBXO17]

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Orthologs 112

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 270
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	URSAM25793 reference isoform	277			5	A0A452R7A8

Protein Sequence

Download: Fasta

MGARPSRRRL PADPPLALDA LPPELLVQVL SHVPPRALVT RCRAVCRAWR DVVDGPTVWL    60
LQLARDRSAE GRALYAVAQR CPPNSEDEEF PLCALARYCL RAPLGRNLIF NSCGEQGFRG   120
WEVEHGGNGW AVEKNLTLVP GAPSQTCFVT SFQWCFKRQL VDLVMEGVWQ ELLDSAQIEI   180
CVADWWGARE NCGCIYRLRV RLLDMYENEV VKFSASPNPV LQWTERGCRQ VSHVFTNFGK   240
GIRYVSFEQY GRDTRSWVGH YGALVTHSSV RVRIRLS                            277

cDNA Sequence

Download: Fasta

ATGGGAGCCC GGCCCTCTCG GCGACGGCTG CCCGCGGACC CGCCCCTAGC CTTGGACGCG    60
CTGCCCCCGG AGCTGCTGGT GCAGGTGTTG AGCCACGTGC CCCCGCGCGC ACTGGTGACG   120
CGCTGTCGCG CAGTGTGCCG CGCCTGGCGC GACGTGGTGG ACGGGCCCAC CGTGTGGCTG   180
CTGCAGCTGG CCCGCGACCG CAGCGCCGAG GGCCGCGCAC TCTACGCGGT GGCCCAGCGC   240
TGCCCGCCCA ACAGCGAAGA CGAGGAGTTC CCGCTCTGCG CCCTGGCGCG CTACTGCCTG   300
CGCGCGCCCC TCGGCCGCAA CCTCATCTTC AACTCCTGCG GAGAGCAGGG CTTCAGAGGC   360
TGGGAGGTGG AGCATGGCGG GAATGGCTGG GCCGTGGAAA AGAACCTAAC ACTGGTGCCG   420
GGGGCTCCTT CCCAGACCTG CTTCGTGACT TCTTTCCAAT GGTGCTTCAA GAGGCAGCTT   480
GTAGACTTGG TGATGGAGGG GGTGTGGCAG GAGCTGCTGG ACAGCGCCCA GATCGAGATC   540
TGTGTGGCCG ATTGGTGGGG TGCCCGCGAG AACTGTGGCT GCATCTACCG GCTCCGGGTC   600
CGCCTCCTGG ACATGTACGA AAACGAAGTG GTCAAGTTCT CGGCCTCACC CAACCCAGTC   660
CTTCAGTGGA CGGAGAGAGG CTGCCGACAG GTGTCTCATG TCTTCACCAA CTTTGGCAAG   720
GGCATCCGCT ACGTGTCTTT TGAGCAGTAT GGGAGGGACA CGCGTTCCTG GGTGGGGCAC   780
TATGGCGCCC TGGTGACCCA CTCCAGTGTG AGGGTCAGGA TCCGCCTGTC CTAG         834