Sequences for URSAM24756

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Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene URSAM24756 (A0A452SPI6)

E Ursus americanus | Dolichyldiphosphatase [DOLPP1]

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Orthologs 622

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 80
Gene information
GO Annotations
Sequences/Isoforms 2
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	URSAM24757	195			7	A0A452SPH5
	URSAM24756 reference isoform	238			8	A0A452SPI6

Protein Sequence

Download: Fasta

MAADGQCSLP ASWRPVTLTH VEYPTGDLSG HLLAYLSLSP VFVIVGFVTL IIFKRELHTI    60
SFLGGLALNE GVNWLIKHVI QEPRPCGGPH MAVGTKYGMP SSHSQFMWFF SVYSFLFLYL   120
RMHQTNNARF LDLLWRHVLS LGLLTAAFLV SYSRVYLLYH TWSQVLYGGI AGSLMAVAWF   180
AFTQEVLTPL FPRIAAWPIS EFFLIRDTSL IPNVLWFEYT VTRAEARNRQ RKLGTKLQ     238

cDNA Sequence

Download: Fasta

ATGGCAGCGG ACGGACAGTG CTCGCTCCCC GCTTCATGGC GGCCGGTGAC CCTCACCCAC    60
GTCGAATATC CTACAGGTGA TCTCTCTGGC CACCTCCTTG CCTACCTGAG CCTCAGCCCT   120
GTCTTCGTCA TTGTTGGTTT CGTGACCCTC ATCATATTCA AGCGGGAGCT GCACACGATT   180
TCGTTCCTGG GGGGCCTGGC GCTGAACGAG GGGGTCAACT GGCTGATCAA ACACGTCATC   240
CAGGAGCCAC GGCCCTGTGG AGGCCCCCAC ATGGCAGTGG GCACCAAGTA CGGGATGCCC   300
TCCAGCCATT CCCAATTTAT GTGGTTCTTC TCCGTCTATT CCTTCCTTTT CCTGTATTTA   360
AGAATGCACC AAACAAACAA CGCCAGGTTC CTGGACTTGC TGTGGAGGCA CGTGCTCTCC   420
CTGGGTCTCC TCACCGCGGC CTTTCTAGTC TCCTATAGCA GGGTCTACCT GCTGTACCAC   480
ACGTGGAGCC AGGTGCTCTA TGGGGGCATT GCTGGGAGCC TCATGGCCGT CGCCTGGTTC   540
GCCTTCACCC AGGAGGTCCT CACCCCGCTG TTCCCTAGGA TAGCAGCCTG GCCTATCTCT   600
GAGTTCTTCC TAATCCGAGA CACGAGCCTC ATTCCCAACG TACTGTGGTT TGAGTACACA   660
GTAACCCGGG CAGAAGCCAG GAACAGACAG CGTAAGCTGG GGACAAAACT GCAGTGA      717