Sequences for SPAAU24013

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene SPAAU24013 (A0A671YTR1)

E Sparus aurata | palmitoyl-protein hydrolase [lypla2]

‹

Orthologs 1492

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 983
Gene information
GO Annotations
Sequences/Isoforms 3
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	SPAAU24011	230			9	A0A671YTR1
	SPAAU24012	214			8	A0A671YY74
	SPAAU24013 reference isoform	237			10	A0A671YTR1

Protein Sequence

Download: Fasta

MKHLLQCMCG NNMSLPLLKE AATVSGSEKE TAAVIFLHGL GDTGQGWADT MTEFQLPHVK    60
YIFPHAPRIP VTLNLKSVMP AWFDLMGLTP DSPEDESGIK KAADNIKAII EHEAKNGIPP   120
NRIMLGGFSQ GGALSLYTAL TCQHQLGGVV ALSCWLPLHK SFPSASSGNR NLPILQCHGE   180
MDTMIPVQFG AMTAEMLKSL VDPKMITFKT YPGLSHSSSH QEMEAVKEFI EKHLPRI      237

cDNA Sequence

Download: Fasta

ATGAAGCACC TCCTACAGTG TATGTGTGGC AACAACATGT CTTTGCCGCT GCTCAAGGAG    60
GCTGCGACGG TGTCCGGGTC GGAGAAGGAG ACCGCGGCGG TGATCTTCCT TCATGGGTTG   120
GGAGACACAG GACAAGGATG GGCCGACACT ATGACGGAGT TTCAGCTGCC TCACGTCAAG   180
TACATCTTCC CCCACGCACC CAGAATTCCT GTCACTCTTA ACCTGAAGTC GGTGATGCCC   240
GCGTGGTTTG ACCTCATGGG TCTCACCCCC GATAGCCCAG AAGATGAATC TGGAATCAAG   300
AAGGCAGCAG ATAACATCAA GGCTATAATC GAACATGAGG CCAAAAATGG GATCCCCCCA   360
AACCGTATAA TGCTTGGTGG CTTCTCTCAG GGTGGGGCAT TGTCCTTATA TACCGCCTTG   420
ACCTGCCAGC ATCAGTTGGG TGGTGTTGTG GCTCTCAGTT GCTGGCTACC ACTTCACAAG   480
TCTTTCCCAT CGGCTTCGAG CGGCAACAGG AACCTCCCAA TCCTGCAGTG CCACGGCGAG   540
ATGGACACCA TGATCCCAGT GCAGTTCGGT GCAATGACGG CGGAAATGCT CAAATCCCTA   600
GTCGACCCTA AGATGATCAC CTTCAAAACC TACCCAGGGC TCTCTCACAG CTCCTCTCAT   660
CAGGAGATGG AGGCTGTAAA GGAATTTATC GAGAAGCATT TGCCCCGAAT CTGA         714