Sequences for SHEEP17220

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene SHEEP17220 (W5Q8D8)

E Ovis aries | glutathione transferase [HPGDS]

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Orthologs 388

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 2221
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	SHEEP17220 reference isoform	201			5	W5Q8D8

Protein Sequence

Download: Fasta

HTMPNYKLIY FNMRGRAEII RYIFAYLDIK YEDHRIDQAD WPEIKSTLPF GKIPILEVDG    60
LNLHQSLAIA RYLTRNTDLA GKTELEQCQV DAIVDTLDDF MSRFPWAEKR QDIKNQIFKE   120
LLTCDAPPLL QSLDTYLGEN EWFIGDSVTW ADFYWEICST TLLVFKPDLL DIHPRLVTLR   180
KKVQSIPAIA DWILRRPQTK L                                             201

cDNA Sequence

Download: Fasta

CACACCATGC CAAACTACAA ACTCATTTAT TTTAATATGA GGGGGAGAGC AGAAATTATT    60
CGTTATATAT TTGCCTATTT GGACATAAAA TATGAAGACC ACAGAATAGA CCAAGCTGAT   120
TGGCCTGAAA TCAAGTCAAC TCTTCCATTT GGCAAAATCC CCATTTTGGA AGTTGACGGA   180
CTTAACCTTC ACCAGAGTCT AGCAATAGCA AGATACTTGA CCAGAAACAC AGATTTGGCT   240
GGAAAAACAG AACTTGAACA ATGTCAAGTG GATGCAATTG TGGACACACT GGATGATTTC   300
ATGTCTCGTT TTCCTTGGGC AGAGAAAAGA CAAGATATAA AAAATCAGAT ATTTAAGGAG   360
CTACTTACCT GTGATGCACC TCCTCTTCTG CAAAGTTTGG ACACATACTT AGGGGAAAAC   420
GAGTGGTTTA TTGGTGACTC TGTAACTTGG GCAGACTTCT ACTGGGAAAT TTGCAGTACC   480
ACACTTTTGG TCTTTAAACC TGATTTGTTG GACATCCACC CCAGGCTGGT GACATTACGG   540
AAGAAAGTCC AAAGCATCCC TGCCATCGCT GACTGGATAC TGCGAAGGCC CCAGACCAAA   600
CTCTAG                                                              606