Sequences for SERCA14153

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For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
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To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

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Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene SERCA14153 (A0A8C9KXH9)

E Serinus canaria | Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase [HACD4]

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Orthologs 187

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	SERCA14153 reference isoform	219			6	A0A8C9KXH9

Protein Sequence

Download: Fasta

MNMYLFVYDL MQFCGHSWIF TNMIIRFMTF GKDSLADTFH SIGLVMRLCQ LLSVLEILHI    60
LIGIDKSHLL PRFLQITERL IILFVVINSQ EEVQGKYVVC VLFFLWNLLD VVRYTYNMLA   120
RMGIYYLPLT WLNFSLCIPL YPLSVLAKGF AICVSLPYFE SFGTYSIKLP FPFTFSIYFP   180
YVLKMYLLVL FAGMCFIIRN LFSERMAHLG TSNIKNKRS                          219

cDNA Sequence

Download: Fasta

ATGAACATGT ACCTGTTTGT GTATGACTTA ATGCAATTCT GTGGACATTC TTGGATATTT    60
ACAAATATGA TCATCAGGTT CATGACATTT GGAAAAGATT CACTGGCTGA CACGTTTCAC   120
TCCATAGGAC TCGTCATGCG CCTTTGCCAG TTGTTGTCTG TATTGGAGAT CCTGCACATC   180
CTCATTGGCA TTGACAAAAG CCATCTCCTC CCCAGGTTTT TGCAGATCAC TGAGAGACTA   240
ATTATTTTAT TTGTCGTGAT CAACAGTCAG GAAGAAGTTC AAGGGAAATA TGTCGTCTGT   300
GTTTTATTTT TCCTTTGGAA TTTATTAGAT GTGGTCAGGT ACACTTACAA TATGTTGGCA   360
AGGATGGGCA TATACTACCT ACCACTAACA TGGCTCAACT TCTCCCTGTG CATCCCACTT   420
TATCCCCTTT CAGTTCTGGC TAAAGGATTT GCAATTTGTG TATCACTGCC TTATTTTGAA   480
TCCTTTGGCA CGTACTCCAT CAAGCTACCA TTTCCATTCA CCTTCTCAAT CTACTTCCCC   540
TATGTCCTGA AAATGTACCT GCTGGTGCTC TTTGCAGGTA TGTGCTTTAT CATCCGGAAC   600
CTCTTCTCTG AGAGAATGGC ACACCTAGGG ACCAGCAACA TCAAAAATAA AAGAAGCTAA   660